RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GLI1P08151 1106 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 ADRB3P13945 408 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 JUNDP17535 347 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 RECQLP46063 649 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 RABIFP47224 123 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 CLCN6P51797 869 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 RPS21P63220 83 aaKnown RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 EIF2B5Q13144 721 aaKnown RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 PDE1CQ14123 709 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 NR0B2Q15466 257 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 KIF26BQ2KJY2 2108 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 ISM2Q6H9L7 571 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 KIAA1161Q6NSJ0 714 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 TTI2Q6NXR4 508 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 OLFML1Q6UWY5 402 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 PARS2Q7L3T8 475 aaKnown RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 TFAP2DQ7Z6R9 452 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 PASD1Q8IV76 773 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 SLC35F3Q8IY50 421 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 ZNF683Q8IZ20 524 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 FMR1NBQ8N0W7 255 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 WDTC1Q8N5D0 677 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 EXD3Q8N9H8 876 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 OR7D4Q8NG98 312 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 WDR36Q8NI36 951 aaKnown RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 SPATA20Q8TB22 786 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 FAM174AQ8TBP5 190 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 SMARCE1Q969G3 411 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 GRAMD1AQ96CP6 724 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 PPP1R16AQ96I34 528 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 KLF6Q99612 283 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 IL12RB2Q99665 862 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 SCAND2PQ9GZW5 306 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 TCEAL2Q9H3H9 227 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 SYNDIG1Q9H7V2 258 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 UBE2TQ9NPD8 197 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 PIGVQ9NUD9 493 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 ASNSD1Q9NWL6 643 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 NCKIPSDQ9NZQ3 722 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 MPP6Q9NZW5 540 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 GGT7Q9UJ14 662 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 SALL4Q9UJQ4 1053 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 ITM2BQ9Y287 266 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 FADS3Q9Y5Q0 445 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 CCDC187A0A096LP49 1063 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 IGLON5A6NGN9 336 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 BECN2A8MW95 431 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 FPGTO14772 594 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 TPP1O14773 563 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 EFSO43281 561 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 GCATO75600 419 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 TCEA3O75764 348 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 SMC2O95347 1197 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 ERBB2P04626 1255 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 ITGB7P26010 798 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 L1CAMP32004 1257 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 ABL2P42684 1182 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 PFN3P60673 137 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 NFKB2Q00653 900 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 SRSF6Q13247 344 aaKnown RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 C1orf61Q13536 156 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 ARL13BQ3SXY8 428 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 LINC00303Q3SY05 128 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 EFHC1Q5JVL4 640 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 KLHL10Q6JEL2 608 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 GJB7Q6PEY0 223 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 B3GNT8Q7Z7M8 397 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 SETD3Q86TU7 594 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 TRIM59Q8IWR1 403 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 ARL14Q8N4G2 192 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 C1orf131Q8NDD1 294 aaKnown RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 TPCN2Q8NHX9 752 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 DHTKD1Q96HY7 919 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 FEM1CQ96JP0 617 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 PPP1R13BQ96KQ4 1090 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 CCNL2Q96S94 520 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 CCDC3Q9BQI4 270 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 BOCQ9BWV1 1114 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 TKTL2Q9H0I9 626 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 ARHGEF38Q9NXL2 777 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 APOBEC3BQ9UH17 382 aaKnown RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 IPO11Q9UI26 975 aaKnown RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 ATXN7L1Q9ULK2 861 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 PNMA8BQ9ULN7 279 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-209ENST00000553308 ACTL7AQ9Y615 435 aa9.26□□□□□ -0.93
SYNE2-209ENST00000553308 RP1P56715 2156 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 AP1G1O43747 822 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 ZMPSTE24O75844 475 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 AFPP02771 609 aaKnown RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 ITGA2BP08514 1039 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 GKP32189 559 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 USP8P40818 1118 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 MLLT3P42568 568 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 SERPINH1P50454 418 aaKnown RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 CSRP3P50461 194 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 DNA2P51530 1060 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms