RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 KCNK3O14649 394 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 YKT6O15498 198 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 KDELR3O43731 214 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 CREB3O43889 395 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 RNGTTO60942 597 aaKnown RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 CD160O95971 181 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 FTLP02792 175 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 FTH1P19P0C7X4 201 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 CCNHP51946 323 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 YBEYP58557 167 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 OGDHQ02218 1023 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 OVGP1Q12889 678 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 STAT4Q14765 748 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 IQCHQ86VS3 1027 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 MFSD2AQ8NA29 543 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 BAHD1Q8TBE0 780 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 GRIN3AQ8TCU5 1115 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 TRIM11Q96F44 468 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 LRIG1Q96JA1 1093 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 ELF4Q99607 663 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 ERVMER34-1Q9H9K5 563 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 HECAQ9UBI9 543 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 APOBEC2Q9Y235 224 aaKnown RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 NEUROG3Q9Y4Z2 214 aa13.2□□□□□ -0.3
ACTN1-207ENST00000553290 BZW2Q9Y6E2 419 aaKnown RBP13.2□□□□□ -0.3
ACTN1-207ENST00000553290 TMEM191CA6NGB0 347 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 PRAMEF26H0Y7S4 382 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 DDX3XO00571 662 aaKnown RBP eCLIP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 WNT9AO14904 365 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 FGF10O15520 208 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 HYAL3O43820 417 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 RNF8O76064 485 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 TOP3BO95985 862 aaKnown RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 GSRP00390 522 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 MYBL1P10243 752 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 SPINK2P20155 84 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 PSMA2P25787 234 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 ITGB7P26010 798 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 GRK6P43250 576 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 ARRB1P49407 418 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 NEK3P51956 506 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 UBASH3AP57075 661 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 NXPH1P58417 271 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 SNRPD1P62314 119 aaKnown RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 RAB44Q7Z6P3 723 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 HORMAD1Q86X24 394 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 OXR1Q8N573 874 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 CASKIN2Q8WXE0 1202 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 SYN2Q92777 582 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
ACTN1-207ENST00000553290 NCAPGQ9BPX3 1015 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 TM6SF2Q9BZW4 377 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 ZDHHC6Q9H6R6 413 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 ACTL7AQ9Y615 435 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 DOCK9Q9BZ29 2069 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 EPG5Q9HCE0 2579 aa13.19□□□□□ -0.3
ACTN1-207ENST00000553290 A0A1W2PQU0 124 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 RASA4BC9J798 803 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 RNF103O00237 685 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 RASA4O43374 803 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 BUB1O43683 1085 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 PCDH8O95206 1070 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 POP4O95707 220 aaKnown RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 SKILP12757 684 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 ADRB3P13945 408 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 PBX1P40424 430 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 TPI1P60174 286 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 ST3GAL2Q16842 350 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 SKOR2Q2VWA4 1001 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 PARP15Q460N3 678 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 INO80DQ53TQ3 878 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 ERMARDQ5T6L9 678 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 FBXL19Q6PCT2 694 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 UNQ6494/PRO21346Q6UXR6 183 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 UMODL1-AS1Q8N2C9 162 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 RYBPQ8N488 228 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 CHCHD4Q8N4Q1 142 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 OR2AP1Q8NGE2 309 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 ADAMTS14Q8WXS8 1223 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 FEM1CQ96JP0 617 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 ISCUQ9H1K1 167 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 NOL6Q9H6R4 1146 aaKnown RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 MRPL47Q9HD33 250 aaKnown RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 CNOT8Q9UFF9 292 aaKnown RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 AP4E1Q9UPM8 1137 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 BTBD3Q9Y2F9 522 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 FRYQ5TBA9 3013 aa13.18□□□□□ -0.3
ACTN1-207ENST00000553290 MAP1BP46821 2468 aaKnown RBP13.18□□□□□ -0.3
ACTN1-207ENST00000553290 FAM221BA6H8Z2 402 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 TNFSF14O43557 240 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms