RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NAGPAQ9UK23 515 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 KCTD3Q9Y597 815 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 PCDHA5Q9Y5H7 936 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 LRBAP50851 2863 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ZFHX3Q15911 3703 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 NBPF19A0A087WUL8 3843 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ARHGAP10A1A4S6 786 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ALG1L2C9J202 215 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 M0QYT0 321 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 NKX2-8O15522 239 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 PLRG1O43660 514 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 HMBSP08397 361 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 FAM157BP0CG42 384 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 HGFP14210 728 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 NME1P15531 152 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 PDCP20941 246 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 BMP6P22004 513 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 HNRNPA2B1P22626 353 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ITGB7P26010 798 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 MAP4P27816 1152 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 PSMD8P48556 350 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 CDKN1CP49918 316 aaPredicted RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 CACNA2D1P54289 1103 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 CLCQ05315 142 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ZFP36L1Q07352 338 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 EFEMP1Q12805 493 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 TRPC3Q13507 836 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ELAVL3Q14576 367 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 LBRQ14739 615 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 DEFB133Q30KQ1 61 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 WDR72Q3MJ13 1102 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ZNF542PQ5EBM4 170 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 PERM1Q5SV97 790 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ADGRF1Q5T601 910 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 SLC39A4Q6P5W5 647 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 LVRNQ6Q4G3 990 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 SPNS3Q6ZMD2 512 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 SPATC1Q76KD6 591 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 THNSL2Q86YJ6 484 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 BRSK2Q8IWQ3 736 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 CACNA2D3Q8IZS8 1091 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 LINC00528Q8N1L1 170 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 SDR16C5Q8N3Y7 309 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 TAB3Q8N5C8 712 aaPredicted RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 AADATQ8N5Z0 425 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 TMEM145Q8NBT3 493 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ZNF548Q8NEK5 533 aaPredicted RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 CXorf38Q8TB03 319 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 JPH3Q8WXH2 748 aaPredicted RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 MFSD3Q96ES6 412 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 SGSM3Q96HU1 749 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 PPP1R9BQ96SB3 815 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 TM9SF2Q99805 663 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 MRPL45Q9BRJ2 306 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 FOXP3Q9BZS1 431 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ST6GALNAC4Q9H4F1 302 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 GPN2Q9H9Y4 310 aaPredicted RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 INTS13Q9NVM9 706 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ZFATQ9P243 1243 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 GULP1Q9UBP9 304 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 SIX4Q9UIU6 781 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 NUDT5Q9UKK9 219 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 NOL7Q9UMY1 257 aaKnown RBP5.32□□□□□ -1.56
CKAP4-203ENST00000553039 CEP83Q9Y592 693 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ANK1P16157 1881 aa5.32□□□□□ -1.56
CKAP4-203ENST00000553039 ANAPC1Q9H1A4 1944 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TMEM131Q92545 1883 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 SPTY2D1-AS1A0A0U1RR47 76 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 A0A1W2PQH9 124 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TYW5A2RUC4 315 aaKnown RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ZNF233A6NK53 670 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 A6NNZ2 444 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TCP11X1B4DZS4 312 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 C9orf172C9J069 976 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 D6RAR5 112 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 C1QTNF3-AMACRE9PGA6 284 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 LMO7DNF2Z398 122 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 KIAA0391O15091 583 aaKnown RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 INPP4BO15327 924 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 DIAPH2O60879 1101 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TBCAO75347 108 aaKnown RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 RPLP0P05388 317 aaKnown RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 RARAP10276 462 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PRF1P14222 555 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 LIFP15018 202 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ZNF18P17022 549 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 TCN2P20062 427 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 CAPN3P20807 821 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ITGA3P26006 1051 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 RABIFP47224 123 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PGFP49763 221 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 SLC12A3P55017 1021 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 ADKP55263 362 aaKnown RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PER3P56645 1201 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 MAP3K7CLP57077 242 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 RNASE9P60153 205 aaKnown RBP5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PPP2CBP62714 309 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 PPP2CAP67775 309 aa5.31□□□□□ -1.56
CKAP4-203ENST00000553039 CCL7P80098 99 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms