RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 PTPN7P35236 360 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 GJC1P36383 396 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 STK19P49842 368 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 IRAK1P51617 712 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 ARSEP51690 589 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 CCDC173Q0VFZ6 552 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 GALNT2Q10471 571 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 CA9Q16790 459 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 MYLK3Q32MK0 819 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 MAP7D1Q3KQU3 841 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 PLK5Q496M5 336 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 RAB6CQ53S08 254 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 SLC45A4Q5BKX6 768 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 LYSMD4Q5XG99 296 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 PMS2CLQ68D20 193 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 KIAA1211LQ6NV74 962 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 FBXL19Q6PCT2 694 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 BRAT1Q6PJG6 821 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 Q6ZVU0 165 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 MMAAQ8IVH4 418 aaKnown RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 CCDC50Q8IVM0 306 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 SFTPA1Q8IWL2 248 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 RYBPQ8N488 228 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 PAF1Q8N7H5 531 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 OR2A12Q8NGT7 310 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 OR2T34Q8NGX1 318 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 P2RY11Q96G91 374 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 PSKH2Q96QS6 385 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 FAM129BQ96TA1 746 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 VAT1Q99536 393 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 HINFPQ9BQA5 517 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 C1QTNF7Q9BXJ2 289 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 ZDHHC5Q9C0B5 715 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 MKRN2Q9H000 416 aaKnown RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 RAB6CQ9H0N0 254 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 PREBQ9HCU5 417 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 WSB2Q9NYS7 404 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 HECAQ9UBI9 543 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 DKK3Q9UBP4 350 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 HCN2Q9UL51 889 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 DNPEPQ9ULA0 475 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 R4GN57 208 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 SPAG17Q6Q759 2223 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 FANCMQ8IYD8 2048 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 PTPRZ1P23471 2315 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 IGHV1OR15-9A0A0B4J2B8 117 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 MACROD2A1Z1Q3 448 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 KPNA3O00505 521 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 MATN3O15232 486 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 HRO43593 1189 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 AP1G1O43747 822 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 SOCS5O75159 536 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 RNASEH2AO75792 299 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 TMCC1O94876 653 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 SEMA4FO95754 770 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 ACVRL1P37023 503 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 GARSP41250 739 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 CTSOP43234 321 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 CCR5P51681 352 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 CCNHP51946 323 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 NEK3P51956 506 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 ARF5P84085 180 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 ARHGAP8P85298 464 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 ELP6Q0PNE2 266 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 OVGP1Q12889 678 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 XRCC4Q13426 336 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 LBRQ14739 615 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 TEAD4Q15561 434 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 ZNF805Q5CZA5 627 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 SLC9A4Q6AI14 798 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 CYP2U1Q7Z449 544 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 RFX6Q8HWS3 928 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 SYT12Q8IV01 421 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 STK40Q8N2I9 435 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 CCNYQ8ND76 341 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 ACRBPQ8NEB7 543 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 PIP4K2CQ8TBX8 421 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 P3H4Q92791 437 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 HDAC11Q96DB2 347 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 TOE1Q96GM8 510 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 ZNF419Q96HQ0 510 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 FEM1CQ96JP0 617 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 SRPK1Q96SB4 655 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 NAP1L3Q99457 506 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 NUSAP1Q9BXS6 441 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 TPSD1Q9BZJ3 242 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 SLC39A8Q9C0K1 460 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 POLR1EQ9GZS1 481 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 NOL6Q9H6R4 1146 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 VPS45Q9NRW7 570 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 GUCA1BQ9UMX6 200 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 CYP8B1Q9UNU6 501 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 DMTF1Q9Y222 760 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 CHD5Q8TDI0 1954 aa10.43□□□□□ -0.74
TRAFD1-208ENST00000552890 FAM186AA6NE01 2351 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 PRR23AA6NEV1 266 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 MEI4A8MW99 385 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 APOC4-APOC2K7ER74 178 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 KRIT1O00522 736 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 TSPAN6O43657 245 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms