RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 PADI4Q9UM07 663 aa11.64□□□□□ -0.55
SUPT16H-202ENST00000552829 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
SUPT16H-202ENST00000552829 MED13Q9UHV7 2174 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 LMO7DNF2Z398 122 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 POLR2DO15514 142 aaKnown RBP11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 LETM1O95202 739 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 VDRP11473 427 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 HGFP14210 728 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 ZNF18P17022 549 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 CHRNA3P32297 505 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 RABIFP47224 123 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 RPIAP49247 311 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 RGS7P49802 495 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 CCDC15Q0P6D6 951 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 EIF4EBP2Q13542 120 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 ACCSLQ4AC99 568 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 RAP1GAP2Q684P5 730 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 KRT39Q6A163 491 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 HIST2H2BCQ6DN03 193 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 LCLAT1Q6UWP7 414 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 ZSCAN1Q8NBB4 408 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 OR52K2Q8NGK3 314 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 GLMNQ92990 594 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 SERPINB11Q96P15 392 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 TCEAL2Q9H3H9 227 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 KCNK4Q9NYG8 393 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 TUBD1Q9UJT1 453 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 ANAPC2Q9UJX6 822 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 PNMA8BQ9ULN7 279 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 PAXBP1Q9Y5B6 917 aa11.63□□□□□ -0.55
SUPT16H-202ENST00000552829 A0A1W2PQM1 296 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 ENO4A6NNW6 628 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 D6RAR5 112 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 PCDH8O95206 1070 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 MOCS2O96007 188 aaPredicted RBP11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 PAK4O96013 591 aaPredicted RBP11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 IGLV3-25P01717 112 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 CCR10P46092 362 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 OXCT1P55809 520 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 PFN3P60673 137 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 KRBA2Q6ZNG9 492 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 ERN2Q76MJ5 926 aaKnown RBP11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 BEND5Q7L4P6 421 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 TAC4Q86UU9 113 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 CHSY1Q86X52 802 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 CIR1Q86X95 450 aaPredicted RBP11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 ZFAND4Q86XD8 727 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 GRAMD1CQ8IYS0 662 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 FBXL13Q8NEE6 735 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 OR2A12Q8NGT7 310 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 BTN2A2Q8WVV5 523 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 TFAP2BQ92481 460 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 BTN2A3PQ96KV6 586 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 HSFY1Q96LI6 401 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 LENG8Q96PV6 779 aaPredicted RBP11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 ZSWIM1Q9BR11 485 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 FOXP3Q9BZS1 431 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 STRADBQ9C0K7 418 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 CLPBQ9H078 707 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 EPB41L5Q9HCM4 733 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 RAB20Q9NX57 234 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 SEPT10Q9P0V9 454 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 SPASTQ9UBP0 616 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 SLC25A13Q9UJS0 675 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 KIAA1257Q9ULG3 409 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 NAALADL1Q9UQQ1 740 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 HS3ST2Q9Y278 367 aa11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 ARHGEF17Q96PE2 2063 aaPredicted RBP11.62□□□□□ -0.55
SUPT16H-202ENST00000552829 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 PRAMEF33A0A0G2JMD5 474 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 A0A1W2PQC6 194 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 TCAF2A6NFQ2 919 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 PIK3R2O00459 728 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 KPNA3O00505 521 aaPredicted RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 YY2O15391 372 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 CALUO43852 315 aaPredicted RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 PRAMEF10O60809 474 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 FBXO21O94952 628 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 MT-CO1P00395 513 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 SRCP12931 536 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 KRT13P13646 458 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 CD19P15391 556 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 DEKP35659 375 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 ETV5P41161 510 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 RPL34P49207 117 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 ADKP55263 362 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 RPS21P63220 83 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 CCL7P80098 99 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 TYRO3Q06418 890 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 ZFP36L1Q07352 338 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 KCNAB2Q13303 367 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 PNOCQ13519 176 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 ZC3H12AQ5D1E8 599 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 PRRT3Q5FWE3 981 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 TTC39BQ5VTQ0 682 aaPredicted RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 SYPL2Q5VXT5 272 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 KIAA1161Q6NSJ0 714 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 SASS6Q6UVJ0 657 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms