RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 ALDH2P05091 517 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 SLC10A3P09131 477 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 BMP1P13497 986 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 YWHAQP27348 245 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 SERPINB9P50453 376 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 SREBF2Q12772 1141 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 CDH17Q12864 832 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 COL9A2Q14055 689 aaPredicted RBP5.67□□□□□ -1.5
LIMA1-215ENST00000552823 SPDYAQ5MJ70 313 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 TEDDM1Q5T9Z0 273 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 PIK3R6Q5UE93 754 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 DCLRE1AQ6PJP8 1040 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 RNF19BQ6ZMZ0 732 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 RGS9BPQ6ZS82 235 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 PIM3Q86V86 326 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 CEP97Q8IW35 865 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 KCNN1Q92952 543 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 ACBD6Q9BR61 282 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 TLR9Q9NR96 1032 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 ARHGEF38Q9NXL2 777 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 HACD1B0YJ81 288 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 STX16-NPEPL1H3BU86 382 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 TLR5O60602 858 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 GLRA3O75311 464 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 INHAP05111 366 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 JUNP05412 331 aaKnown RBP5.67□□□□□ -1.5
LIMA1-215ENST00000552823 GSTA2P09210 222 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 UBTFL6P0CB48 400 aaPredicted RBP5.67□□□□□ -1.5
LIMA1-215ENST00000552823 FGF3P11487 239 aaPredicted RBP5.67□□□□□ -1.5
LIMA1-215ENST00000552823 GABRB3P28472 473 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 PMLP29590 882 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 SLC8A1P32418 973 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 CRHR1P34998 444 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 CASP2P42575 452 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 GRIA4P48058 902 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 ARSDP51689 593 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 GSCP56915 257 aaPredicted RBP5.67□□□□□ -1.5
LIMA1-215ENST00000552823 ASPHQ12797 758 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 GRIK3Q13003 919 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 ZNF235Q14590 738 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 PCLAFQ15004 111 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 ACSBG2Q5FVE4 666 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 RTP2Q5QGT7 225 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 MARC1Q5VT66 337 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 NAPEPLDQ6IQ20 393 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 FBXL22Q6P050 247 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 CD300LGQ6UXG3 332 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 RIPOR1Q6ZS17 1223 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 DEFB107AQ8IZN7 70 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 TDRD5Q8NAT2 981 aaKnown RBP5.67□□□□□ -1.5
LIMA1-215ENST00000552823 OR13C4Q8NGS5 318 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 KCTD13Q8WZ19 329 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 RSRC1Q96IZ7 334 aaKnown RBP5.67□□□□□ -1.5
LIMA1-215ENST00000552823 CAPNS2Q96L46 248 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 HBEGFQ99075 208 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 BTBD10Q9BSF8 475 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 TM6SF2Q9BZW4 377 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 PHACTR1Q9C0D0 580 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 WWP1Q9H0M0 922 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 ABCC13Q9NSE7 274 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 COPG2Q9UBF2 871 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 PCDHGC4Q9Y5F7 938 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 CNTRLQ7Z7A1 2325 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 WDR90Q96KV7 1748 aa5.67□□□□□ -1.5
LIMA1-215ENST00000552823 ZCWPW2A0A1B0GU75 182 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 ERI2A8K979 691 aaKnown RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 CIB2O75838 187 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 GKP32189 559 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 RPL9P32969 192 aaKnown RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 SLC1A2P43004 574 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 GLUD2P49448 558 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PPIDQ08752 370 aaKnown RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PLD1Q13393 1074 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PAFAH1B3Q15102 231 aaKnown RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 ARL13AQ5H913 290 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PDPK2PQ6A1A2 396 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 NEPROQ6NW34 567 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 SH2D5Q6ZV89 423 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 MYLK4Q86YV6 388 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 NUP93Q8N1F7 819 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PCDH20Q8N6Y1 951 aaKnown RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PPHLN1Q8NEY8 458 aaKnown RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PIWIL2Q8TC59 973 aaKnown RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 LINC01599Q8WXQ3 324 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 MYLIPQ8WY64 445 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 MTBPQ96DY7 904 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 IFT43Q96FT9 208 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 GORASP1Q9BQQ3 440 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 ACE2Q9BYF1 805 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-215ENST00000552823 GBA3Q9H227 469 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PIF1Q9H611 641 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 ALG9Q9H6U8 611 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 CATSPERBQ9H7T0 1116 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 COG4Q9H9E3 785 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 THAP1Q9NVV9 213 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 DSEQ9UL01 958 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 PCDHB5Q9Y5E4 795 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 ARL5AQ9Y689 179 aa5.66□□□□□ -1.5
LIMA1-215ENST00000552823 MOXD2PA6NHM9 499 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms