RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.6□□□□□ -1.99
CPSF6-207ENST00000551516 KIAA1217Q5T5P2 1943 aa2.6□□□□□ -1.99
CPSF6-207ENST00000551516 NOTCH4Q99466 2003 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 UNC79Q9P2D8 2635 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 DOCK8Q8NF50 2099 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 A0A1B0GTW7 788 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ESYT2A0FGR8 921 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 TMEM150BA6NC51 233 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 AQP7P3A6NL99 342 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 B4DLN1 442 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 LEFTY2O00292 366 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 MSH4O15457 936 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 TEX28O15482 410 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ADAM12O43184 909 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PIP5K1CO60331 668 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 HBP1O60381 514 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 TLR5O60602 858 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 CSDE1O75534 798 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PSMD10O75832 226 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 VNN2O95498 520 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 NDST3O95803 873 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 EDN1P05305 212 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ITGALP20701 1170 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ACO1P21399 889 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 MARK3P27448 753 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 APOBEC3AP31941 199 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 SLC26A2P50443 739 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 GPC3P51654 580 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 CLCN3P51790 818 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 MRPL12P52815 198 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 COPAP53621 1224 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 POLGP54098 1239 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ATXN1P54253 815 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 LOXL3P58215 753 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 LILRA4P59901 499 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 RNASE9P60153 205 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 HSD11B2P80365 405 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 SHC2P98077 582 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 IKQ13123 557 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 HTR4Q13639 388 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 E2F2Q14209 437 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PFKFB4Q16877 469 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 KRTAP19-4Q3LI73 84 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 TUBB8Q3ZCM7 444 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ZACNQ401N2 412 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 SPDYE7PQ495Y7 208 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PLA1AQ53H76 456 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ANKRD45Q5TZF3 282 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 CACHD1Q5VU97 1274 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 METRNLQ641Q3 311 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ARL6IP4Q66PJ3 421 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PLAG1Q6DJT9 500 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 SFRP4Q6FHJ7 346 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 TLDC1Q6P9B6 456 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 CWC27Q6UX04 472 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ANO5Q75V66 913 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 CLNKQ7Z7G1 428 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 GAS2L3Q86XJ1 694 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 KRT73Q86Y46 540 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 C1QL4Q86Z23 238 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 SYT12Q8IV01 421 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ZNF808Q8N4W9 903 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PAF1Q8N7H5 531 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ATG16L2Q8NAA4 619 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 GLIS1Q8NBF1 620 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PSD4Q8NDX1 1056 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 NSUN7Q8NE18 718 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 OR56A1Q8NGH5 318 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ETNPPLQ8TBG4 499 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 Q8TCH9 128 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 HAS1Q92839 578 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 FGF14Q92915 247 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 NECTIN4Q96NY8 510 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 LRRC3BQ96PB8 259 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 KLHL5Q96PQ7 755 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 NEK1Q96PY6 1258 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 MESP1Q9BRJ9 268 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 KRT23Q9C075 422 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ZMYND12Q9H0C1 365 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 XYLT2Q9H1B5 865 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 DEF6Q9H4E7 631 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 FAM83DQ9H4H8 585 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 RNF41Q9H4P4 317 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 DHX33Q9H6R0 707 aaKnown RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 KAT14Q9H8E8 782 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PSTPIP2Q9H939 334 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 RIC8AQ9NPQ8 531 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 NECTIN3Q9NQS3 549 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 XPNPEP1Q9NQW7 623 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 PRMT8Q9NR22 394 aaPredicted RBP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 TBC1D13Q9NVG8 400 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 ETAA1Q9NY74 926 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 RGL1Q9NZL6 768 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 TRPM5Q9NZQ8 1165 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 LUZP4Q9P127 313 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 SLC9A2Q9UBY0 812 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.59□□□□□ -1.99
CPSF6-207ENST00000551516 TCAF1Q9Y4C2 921 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms