RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FANCCQ00597 558 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 FGL2Q14314 439 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 ZNF284Q2VY69 593 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 FIGNQ5HY92 759 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3GQ6DHY5 549 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3CQ6IPX1 549 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 NAPEPLDQ6IQ20 393 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 PARS2Q7L3T8 475 aaKnown RBP13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3Q8IZP1 549 aaPredicted RBP13.28□□□□□ -0.28
NPAS3-209ENST00000551008 CHCHD4Q8N4Q1 142 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 PCDH20Q8N6Y1 951 aaKnown RBP13.28□□□□□ -0.28
NPAS3-209ENST00000551008 PNPLA1Q8N8W4 532 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TMEM145Q8NBT3 493 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 NETO2Q8NC67 525 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 OR6K2Q8NGY2 324 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 VCPIP1Q96JH7 1222 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TM6SF2Q9BZW4 377 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 MAGEH1Q9H213 219 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 IL36AQ9UHA7 158 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 SHROOM3Q8TF72 1996 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 KNTC1P50748 2209 aa13.27□□□□□ -0.28
NPAS3-209ENST00000551008 APC2O95996 2303 aa13.27□□□□□ -0.28
NPAS3-209ENST00000551008 CXorf51AA0A1B0GTR3 108 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 FAM221BA6H8Z2 402 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 TMEM191CA6NGB0 347 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 WASH4PA8MWX3 477 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 FLRT2O43155 660 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 RAMP2O60895 175 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 RNGTTO60942 597 aaKnown RBP13.27□□□□□ -0.29
NPAS3-209ENST00000551008 KRT37O76014 449 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 PRNPP04156 253 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 ATXN1LP0C7T5 689 aaKnown RBP13.27□□□□□ -0.29
NPAS3-209ENST00000551008 PRLRP16471 622 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 ABL2P42684 1182 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 CCT8P50990 548 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 SLC20A2Q08357 652 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 HNRNPDQ14103 355 aaKnown RBP13.27□□□□□ -0.29
NPAS3-209ENST00000551008 TMEM259Q4ZIN3 620 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 CARD16Q5EG05 197 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 SFMBT2Q5VUG0 894 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 SEL1L3Q68CR1 1132 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 RETSATQ6NUM9 610 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 SCYL2Q6P3W7 929 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 LRSAM1Q6UWE0 723 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 GATAD2AQ86YP4 633 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 ADAMTS14Q8WXS8 1223 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 KLK6Q92876 244 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 ISG20Q96AZ6 181 aaKnown RBP13.27□□□□□ -0.29
NPAS3-209ENST00000551008 HMCESQ96FZ2 354 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 ELF4Q99607 663 aaPredicted RBP13.27□□□□□ -0.29
NPAS3-209ENST00000551008 HDAC8Q9BY41 377 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 RETREG1Q9H6L5 497 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 PREBQ9HCU5 417 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 AASDHPPTQ9NRN7 309 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 LRP4O75096 1905 aa13.27□□□□□ -0.29
NPAS3-209ENST00000551008 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 A0A1W2PQU0 124 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 KDELR3O43731 214 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 FTLP02792 175 aaPredicted RBP13.26□□□□□ -0.29
NPAS3-209ENST00000551008 CAPNS1P04632 268 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 GZMAP12544 262 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 TCF4P15884 667 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 ITGB7P26010 798 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 EPHB2P29323 1055 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 FILIP1LQ4L180 1135 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 EFHC2Q5JST6 749 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 ATXN7L2Q5T6C5 722 aaPredicted RBP13.26□□□□□ -0.29
NPAS3-209ENST00000551008 UNQ6494/PRO21346Q6UXR6 183 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 ERN2Q76MJ5 926 aaKnown RBP13.26□□□□□ -0.29
NPAS3-209ENST00000551008 ADAT2Q7Z6V5 191 aaKnown RBP13.26□□□□□ -0.29
NPAS3-209ENST00000551008 PLPP6Q8IY26 295 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 MFSD2AQ8NA29 543 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 SAP25Q8TEE9 199 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 SETD7Q8WTS6 366 aaKnown RBP13.26□□□□□ -0.29
NPAS3-209ENST00000551008 MYOCQ99972 504 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 HEPHQ9BQS7 1158 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 SNRNP25Q9BV90 132 aaKnown RBP13.26□□□□□ -0.29
NPAS3-209ENST00000551008 EDEM3Q9BZQ6 932 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 ISCUQ9H1K1 167 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 LRRC19Q9H756 370 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 PDFQ9HBH1 243 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 FZD3Q9NPG1 666 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 GGT7Q9UJ14 662 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 NENFQ9UMX5 172 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 DMTF1Q9Y222 760 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 NEUROG3Q9Y4Z2 214 aa13.26□□□□□ -0.29
NPAS3-209ENST00000551008 COL27A1Q8IZC6 1860 aaPredicted RBP13.25□□□□□ -0.29
NPAS3-209ENST00000551008 ANKRD11Q6UB99 2663 aaPredicted RBP13.25□□□□□ -0.29
NPAS3-209ENST00000551008 RASA4BC9J798 803 aa13.25□□□□□ -0.29
NPAS3-209ENST00000551008 TLR4O00206 839 aa13.25□□□□□ -0.29
NPAS3-209ENST00000551008 RAD51BO15315 384 aa13.25□□□□□ -0.29
NPAS3-209ENST00000551008 RASA4O43374 803 aa13.25□□□□□ -0.29
NPAS3-209ENST00000551008 CREB3O43889 395 aa13.25□□□□□ -0.29
NPAS3-209ENST00000551008 LRCH4O75427 683 aa13.25□□□□□ -0.29
NPAS3-209ENST00000551008 TMCC1O94876 653 aa13.25□□□□□ -0.29
NPAS3-209ENST00000551008 PROS1P07225 676 aa13.25□□□□□ -0.29
NPAS3-209ENST00000551008 CCDC172P0C7W6 258 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms