RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PHF7Q9BWX1 381 aaPredicted RBP5.73□□□□□ -1.49
CPSF6-206ENST00000550987 ADGRE3Q9BY15 652 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 KLC2Q9H0B6 622 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 GHITMQ9H3K2 345 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 CD248Q9HCU0 757 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 ABHD10Q9NUJ1 306 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 TBC1D14Q9P2M4 693 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 KLQ9UEF7 1012 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 VPS28Q9UK41 221 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 GABRQQ9UN88 632 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 COL5A3P25940 1745 aaPredicted RBP5.73□□□□□ -1.49
CPSF6-206ENST00000550987 ANKARQ7Z5J8 1434 aa5.73□□□□□ -1.49
CPSF6-206ENST00000550987 COL1A1P02452 1464 aaPredicted RBP5.72□□□□□ -1.49
CPSF6-206ENST00000550987 CENPVL1A0A0U1RR11 272 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 B4DLN1 442 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 MPPED1O15442 326 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 PRAMEF2O60811 474 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 METTL18O95568 372 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 CYP4B1P13584 511 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 NR4A1P22736 598 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 NFKBIAP25963 317 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 HMGB2P26583 209 aaKnown RBP5.72□□□□□ -1.49
CPSF6-206ENST00000550987 KRT20P35900 424 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 TXKP42681 527 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 RAD52P43351 418 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 CNGA3Q16281 694 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 ERCC6LQ2NKX8 1250 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 PCID2Q5JVF3 399 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 ABHD17BQ5VST6 288 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 TMCO3Q6UWJ1 677 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 SLC39A5Q6ZMH5 540 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 USP50Q70EL3 339 aaPredicted RBP5.72□□□□□ -1.49
CPSF6-206ENST00000550987 RASAL3Q86YV0 1011 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 C1QL4Q86Z23 238 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 SFTPA1Q8IWL2 248 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 PALM2Q8IXS6 379 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 LCORLQ8N3X6 602 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 METTL6Q8TCB7 284 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 ASB10Q8WXI3 467 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 NCSTNQ92542 709 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 AKAP1Q92667 903 aaKnown RBP eCLIP5.72□□□□□ -1.49
CPSF6-206ENST00000550987 HAS1Q92839 578 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 RFKQ969G6 155 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 SAAL1Q96ER3 474 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 C5orf34Q96MH7 638 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 LENG8Q96PV6 779 aaPredicted RBP5.72□□□□□ -1.49
CPSF6-206ENST00000550987 PLEKHG4BQ96PX9 1271 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 NPAS1Q99742 590 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 BDH2Q9BUT1 245 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 USP44Q9H0E7 712 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 LMAN2LQ9H0V9 348 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 SFXN1Q9H9B4 322 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 BEX4Q9NWD9 120 aaPredicted RBP5.72□□□□□ -1.49
CPSF6-206ENST00000550987 MTMR4Q9NYA4 1195 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 CD207Q9UJ71 328 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 FZD1Q9UP38 647 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 HEMK1Q9Y5R4 338 aaPredicted RBP5.72□□□□□ -1.49
CPSF6-206ENST00000550987 PSAT1Q9Y617 370 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 FAM186AA6NE01 2351 aa5.72□□□□□ -1.49
CPSF6-206ENST00000550987 PALLDQ8WX93 1383 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 GTPBP1O00178 669 aaKnown RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 ORC4O43929 436 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 URI1O94763 535 aaPredicted RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 CAMTA2O94983 1202 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 PDE8BO95263 885 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 SCGB1D1O95968 90 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 EBLN1P0CF75 366 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 LYL1P12980 280 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 PSMA4P25789 261 aaKnown RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 GSTM2P28161 218 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 PTGS2P35354 604 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 RARSP54136 660 aaKnown RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 EEFSECP57772 596 aaKnown RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 RPS3AP61247 264 aaKnown RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 GPC5P78333 572 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 SLC25A3Q00325 362 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 PLP2Q04941 152 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 NEXNQ0ZGT2 675 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 LMAN2Q12907 356 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 ERICH6BQ5W0A0 696 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 KCNV1Q6PIU1 500 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 KYAT3Q6YP21 454 aaKnown RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 USP51Q70EK9 711 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 RRM2BQ7LG56 351 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 ASCL5Q7RTU5 278 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 VPS52Q8N1B4 723 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 TMTC2Q8N394 836 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 ENDOVQ8N8Q3 282 aaKnown RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 IL17DQ8TAD2 202 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 SNX18Q96RF0 628 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 EYA3Q99504 573 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 CENPOQ9BU64 300 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 WDR11Q9BZH6 1224 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 TRIM2Q9C040 744 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 SYNCQ9H7C4 482 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 DUSP22Q9NRW4 184 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 SEPT11Q9NVA2 429 aaKnown RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 DLL3Q9NYJ7 618 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 HCN3Q9P1Z3 774 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 CEP72Q9P209 647 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms