RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 SERAC1Q96JX3 654 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 SLC6A18Q96N87 628 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 CAMK1GQ96NX5 476 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 NCAPGQ9BPX3 1015 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 HDAC8Q9BY41 377 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 KLC2Q9H0B6 622 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 DYRK4Q9NR20 520 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 GPATCH2LQ9NWQ4 482 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 FNDC3AQ9Y2H6 1198 aaKnown RBP13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 PCDHGB2Q9Y5G2 931 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 PLXNA2O75051 1894 aa13.7□□□□□ -0.22
CR383656.13-201ENST00000550928 NCOR2Q9Y618 2525 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 ZSCAN5CA6NGD5 496 aaPredicted RBP13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 RASA4BC9J798 803 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 FGF10O15520 208 aaPredicted RBP13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 RASA4O43374 803 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 BUB1O43683 1085 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 PRPSAP2O60256 369 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 DFNA5O60443 496 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 GYPCP04921 128 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 TPM3P06753 285 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 MIPP30301 263 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 CASP14P31944 242 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 CCNHP51946 323 aaPredicted RBP13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 C21orf59P57076 290 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 FAM193AP78312 1265 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 SERINC3Q13530 473 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 SUZ12Q15022 739 aaKnown RBP13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 ACAP1Q15027 740 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 CA9Q16790 459 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 ZNF423Q2M1K9 1284 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 MYLK3Q32MK0 819 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 INO80DQ53TQ3 878 aaPredicted RBP13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 LAYNQ6UX15 382 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 GRIN3AQ8TCU5 1115 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 PPP1R16AQ96I34 528 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 SNRNP25Q9BV90 132 aaKnown RBP13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 DHX35Q9H5Z1 703 aaKnown RBP13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 PREBQ9HCU5 417 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 AASDHPPTQ9NRN7 309 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 DONSONQ9NYP3 566 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 ANGPTL2Q9UKU9 493 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 AP4E1Q9UPM8 1137 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 DMTF1Q9Y222 760 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 PCDHB9Q9Y5E1 797 aa13.69□□□□□ -0.22
CR383656.13-201ENST00000550928 A0A087X0T9 212 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 SPAARA0A1B0GVQ0 90 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 H0Y8X5 98 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 RNGTTO60942 597 aaKnown RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 LRCH4O75427 683 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 POP4O95707 220 aaKnown RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 GSRP00390 522 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 FAM228BP0C875 321 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 MAT2AP31153 395 aaKnown RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 HNRNPH3P31942 346 aaKnown RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 HCAR3P49019 387 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 TPI1P60174 286 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 SNRPD1P62314 119 aaKnown RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 SIM1P81133 766 aaPredicted RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 SHC2P98077 582 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 NFKBIBQ15653 356 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 TRIP6Q15654 476 aaKnown RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 PARP15Q460N3 678 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 SLC45A4Q5BKX6 768 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 NAPEPLDQ6IQ20 393 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 CYP4V2Q6ZWL3 525 aaPredicted RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 ZNF354CQ86Y25 554 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 PSTKQ8IV42 348 aaKnown RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 NAXDQ8IW45 347 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 MFSD2AQ8NA29 543 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 OR2AP1Q8NGE2 309 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 CASKIN2Q8WXE0 1202 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 VOPP1Q96AW1 172 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 HMCESQ96FZ2 354 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 LRIG1Q96JA1 1093 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 PEBP4Q96S96 227 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 TM6SF2Q9BZW4 377 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 TSPY26PQ9H489 355 aa13.68□□□□□ -0.22
CR383656.13-201ENST00000550928 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 PRAMEF26H0Y7S4 382 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 TLR4O00206 839 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 EEF2KO00418 725 aaKnown RBP13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 DAPK3O43293 454 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 CBFA2T2O43439 604 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 CBFA2T3O75081 653 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 PCDH8O95206 1070 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 ITGB7P26010 798 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 PCK1P35558 622 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 NDST2P52849 883 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 PIGHQ14442 188 aaPredicted RBP13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 STAT4Q14765 748 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 SETMARQ53H47 684 aaPredicted RBP13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 BOLA3Q53S33 107 aa13.67□□□□□ -0.22
CR383656.13-201ENST00000550928 PRAMEF14Q5SWL7 426 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms