RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 ITPKAP23677 461 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 MAOBP27338 520 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 SERPINB6P35237 376 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 MPLP40238 635 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 MARCKSL1P49006 195 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 SNRPD1P62314 119 aaKnown RBP13.97□□□□□ -0.17
TROAP-213ENST00000550709 ZNF33AQ06730 810 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 CNTN1Q12860 1018 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 SFSWAPQ12872 951 aaKnown RBP13.97□□□□□ -0.17
TROAP-213ENST00000550709 MYLK3Q32MK0 819 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 INO80DQ53TQ3 878 aaPredicted RBP13.97□□□□□ -0.17
TROAP-213ENST00000550709 NCBP2-AS2Q69YL0 99 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 USP30Q70CQ3 517 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 RFX6Q8HWS3 928 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 LRRC8AQ8IWT6 810 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 TXLNBQ8N3L3 684 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 ATPAF2Q8N5M1 289 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 PQLC3Q8N755 202 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 CCDC112Q8NEF3 446 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 OR14C36Q8NHC7 312 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 LRRN4Q8WUT4 740 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 CASKIN2Q8WXE0 1202 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 SNX19Q92543 992 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 MAK16Q9BXY0 300 aaKnown RBP13.97□□□□□ -0.17
TROAP-213ENST00000550709 C6orf106Q9H6K1 298 aaPredicted RBP13.97□□□□□ -0.17
TROAP-213ENST00000550709 PDFQ9HBH1 243 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 DDX56Q9NY93 547 aaKnown RBP13.97□□□□□ -0.17
TROAP-213ENST00000550709 EVLQ9UI08 416 aaPredicted RBP13.97□□□□□ -0.17
TROAP-213ENST00000550709 ADGRG1Q9Y653 693 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 WASF2Q9Y6W5 498 aa13.97□□□□□ -0.17
TROAP-213ENST00000550709 FRYLO94915 3013 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 ABCA7Q8IZY2 2146 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 OTOGLQ3ZCN5 2332 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 CXorf51AA0A1B0GTR3 108 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 BCLAF3A2AJT9 711 aaKnown RBP13.96□□□□□ -0.17
TROAP-213ENST00000550709 GRID2IPA4D2P6 1211 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 BTNL10A8MVZ5 291 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 PSTPIP1O43586 416 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 FSBPO95073 299 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 GSRP00390 522 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 C7P10643 843 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 DRD3P35462 400 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 DYNLT1P63172 113 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 GBE1Q04446 702 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 NCEH1Q6PIU2 408 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 KIAA2013Q8IYS2 634 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 RGL4Q8IZJ4 473 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 TMIEQ8NEW7 156 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 OR2AP1Q8NGE2 309 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 KIAA1524Q8TCG1 905 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.96□□□□□ -0.17
TROAP-213ENST00000550709 KRT35Q92764 455 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 ARRDC3Q96B67 414 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 FAF2Q96CS3 445 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 RNF157Q96PX1 679 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 SGK2Q9HBY8 427 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 PARD6AQ9NPB6 346 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 DYRK4Q9NR20 520 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 LHX3Q9UBR4 397 aa13.96□□□□□ -0.17
TROAP-213ENST00000550709 MUC22E2RYF6 1773 aaPredicted RBP13.96□□□□□ -0.18
TROAP-213ENST00000550709 WDR87Q6ZQQ6 2873 aa13.96□□□□□ -0.18
TROAP-213ENST00000550709 GON4LQ3T8J9 2241 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 INSIG1O15503 277 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 POP4O95707 220 aaKnown RBP13.95□□□□□ -0.18
TROAP-213ENST00000550709 IGSF6O95976 241 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 UGT2B4P06133 528 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 IL10RBQ08334 325 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 PAFAH1B3Q15102 231 aaKnown RBP13.95□□□□□ -0.18
TROAP-213ENST00000550709 SF3A2Q15428 464 aaKnown RBP13.95□□□□□ -0.18
TROAP-213ENST00000550709 SPDYCQ5MJ68 293 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 SYCP2LQ5T4T6 812 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 TMCO4Q5TGY1 634 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 DCAF12L1Q5VU92 463 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 KAZNQ674X7 775 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 TCEAL6Q6IPX3 200 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 PLPP6Q8IY26 295 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 TSEN2Q8NCE0 465 aaKnown RBP13.95□□□□□ -0.18
TROAP-213ENST00000550709 CADM4Q8NFZ8 388 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 ANP32BQ92688 251 aaKnown RBP13.95□□□□□ -0.18
TROAP-213ENST00000550709 FOXJ1Q92949 421 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 TCEAL3Q969E4 200 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 ZNF419Q96HQ0 510 aaPredicted RBP13.95□□□□□ -0.18
TROAP-213ENST00000550709 CINPQ9BW66 212 aaPredicted RBP13.95□□□□□ -0.18
TROAP-213ENST00000550709 MIR1-1HGQ9H1L0 117 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 SEMA4GQ9NTN9 838 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 TMEM74BQ9NUR3 256 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 FZD4Q9ULV1 537 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 PCDHGA5Q9Y5G8 931 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 HEY1Q9Y5J3 304 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 USP34Q70CQ2 3546 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 FAM186AA6NE01 2351 aa13.95□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3DA0A087WVF3 549 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3IA0A087WXS9 549 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3EA0A087X179 549 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3KA0A087X1G2 549 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TTC24A2A3L6 582 aaPredicted RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3FA6NER0 549 aaPredicted RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 LRRC72A6NJI9 287 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms