RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 SMAD1Q15797 465 aaKnown RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 HNRNPA1L2Q32P51 320 aaKnown RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 INAVAQ3KP66 663 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 CCDC157Q569K6 752 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 BRMS1LQ5PSV4 323 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 C9orf64Q5T6V5 341 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 FAM72AQ5TYM5 149 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 TTC39BQ5VTQ0 682 aaPredicted RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 HGSNATQ68CP4 663 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 ZNF776Q68DI1 518 aaPredicted RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 KIAA0895LQ68EN5 471 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 FAM72DQ6L9T8 149 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 LAYNQ6UX15 382 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 ZNF571Q7Z3V5 609 aaPredicted RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 FAM72BQ86X60 149 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 CCDC185Q8N715 623 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 C3orf20Q8ND61 904 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 FRS2Q8WU20 508 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 RXFP2Q8WXD0 754 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 CENPIQ92674 756 aaPredicted RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 VOPP1Q96AW1 172 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 RPRD1AQ96P16 312 aaPredicted RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 KCTD15Q96SI1 283 aaPredicted RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 DDX50Q9BQ39 737 aaKnown RBP7.05□□□□□ -1.28
CBX5-204ENST00000550411 ORAI3Q9BRQ5 295 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 TRIM7Q9C029 511 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 TKTL2Q9H0I9 626 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 PDCL3Q9H2J4 239 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 FTSJ1Q9UET6 329 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 SLCO3A1Q9UIG8 710 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 STAP1Q9ULZ2 295 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 SCML1Q9UN30 329 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 ERVW-1Q9UQF0 538 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 TBC1D30Q9Y2I9 924 aa7.05□□□□□ -1.28
CBX5-204ENST00000550411 ATMQ13315 3056 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 A0A087WV48 116 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 A0A1B0GTQ1 180 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 A0A1W2PPC4 97 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 DRGXA6NNA5 263 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 SMTNL1A8MU46 457 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 RNF103O00237 685 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 DDX3XO00571 662 aaKnown RBP eCLIP7.04□□□□□ -1.282e-11■■□□□ 11.8
CBX5-204ENST00000550411 VILLO15195 856 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 CCP110O43303 1012 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 SNAP91O60641 907 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 RNASEH1O60930 286 aaKnown RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 ASLP04424 464 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 IGHV4-34P06331 123 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 ABCB4P21439 1286 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 GLDCP23378 1020 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 RRM1P23921 792 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 MPSTP25325 297 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 NSFP46459 744 aaKnown RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 PLK1P53350 603 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 C21orf59P57076 290 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 SNX16P57768 344 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 ST8SIA6P61647 398 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 RPL7AP62424 266 aaKnown RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 RACK1P63244 317 aaKnown RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 ATP11AP98196 1134 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 FANCCQ00597 558 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 ECT2LQ008S8 904 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 SFSWAPQ12872 951 aaKnown RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 CDO1Q16878 200 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 KCNT1Q5JUK3 1230 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 RABGAP1LQ5R372 815 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 WDR59Q6PJI9 974 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 DHRS13Q6UX07 377 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 CYP4V2Q6ZWL3 525 aaPredicted RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 USP30Q70CQ3 517 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 TFAP2DQ7Z6R9 452 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 TMPRSS12Q86WS5 348 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 MCOLN2Q8IZK6 566 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 ZNF557Q8N988 423 aaPredicted RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 KDM1BQ8NB78 822 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 MSANTD4Q8NCY6 345 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 GANCQ8TET4 914 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 RNF34Q969K3 372 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 FAM131CQ96AQ9 280 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 SKA1Q96BD8 255 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 CRELD1Q96HD1 420 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 RPL10LQ96L21 214 aaKnown RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 FAM129BQ96TA1 746 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 FEM1AQ9BSK4 669 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 ACE2Q9BYF1 805 aaPredicted RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 SIK2Q9H0K1 926 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 RSPH9Q9H1X1 276 aaPredicted RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 PABPC3Q9H361 631 aaKnown RBP7.04□□□□□ -1.28
CBX5-204ENST00000550411 NDFIP2Q9NV92 336 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 FBXL12Q9NXK8 326 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 AIPL1Q9NZN9 384 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 MPP6Q9NZW5 540 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 ADAM22Q9P0K1 906 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 VPS51Q9UID3 782 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 NENFQ9UMX5 172 aa7.04□□□□□ -1.28
CBX5-204ENST00000550411 PIEZO2Q9H5I5 2752 aa7.03□□□□□ -1.28
CBX5-204ENST00000550411 DOPEY2Q9Y3R5 2298 aa7.03□□□□□ -1.28
CBX5-204ENST00000550411 FLNBO75369 2602 aaKnown RBP7.03□□□□□ -1.28
CBX5-204ENST00000550411 A0A0D9SEW6 157 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms