RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 EID2Q8N6I1 236 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 ATP11CQ8NB49 1132 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 CTNNBL1Q8WYA6 563 aaPredicted RBP13.72□□□□□ -0.21
NUP188-211ENST00000550219 CNDP2Q96KP4 475 aaKnown RBP13.72□□□□□ -0.21
NUP188-211ENST00000550219 TBCBQ99426 244 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 NPY6RQ99463 290 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 LACRTQ9GZZ8 138 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 WDCPQ9H6R7 721 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 ANLNQ9NQW6 1124 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 TMPRSS4Q9NRS4 437 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 PARVAQ9NVD7 372 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 ASPMQ8IZT6 3477 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 PTPRBP23467 1997 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
NUP188-211ENST00000550219 KPNA3O00505 521 aaPredicted RBP13.71□□□□□ -0.21
NUP188-211ENST00000550219 ENC1O14682 589 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 SLC7A4O43246 635 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 PLRG1O43660 514 aaKnown RBP13.71□□□□□ -0.21
NUP188-211ENST00000550219 MTA2O94776 668 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 DKK1O94907 266 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 SRCP12931 536 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 HOXB3P14651 431 aaPredicted RBP13.71□□□□□ -0.21
NUP188-211ENST00000550219 ARRB1P49407 418 aaPredicted RBP13.71□□□□□ -0.21
NUP188-211ENST00000550219 NXPH1P58417 271 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 DNAJC3Q13217 504 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 SHBQ15464 509 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 BRMS1LQ5PSV4 323 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 AGBL4Q5VU57 503 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 DNAJC24Q6P3W2 148 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 LINGO4Q6UY18 593 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 PHLDB2Q86SQ0 1253 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 TXLNBQ8N3L3 684 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 GRIN3AQ8TCU5 1115 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 RFFLQ8WZ73 363 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 KLK6Q92876 244 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 CCDC114Q96M63 670 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 PSMB7Q99436 277 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 KCND1Q9NSA2 647 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 ARHGEF38Q9NXL2 777 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 RRN3Q9NYV6 651 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 MPP6Q9NZW5 540 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 UVRAGQ9P2Y5 699 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 VPS51Q9UID3 782 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 CA5BQ9Y2D0 317 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 PPP2R2CQ9Y2T4 447 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 RAXQ9Y2V3 346 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 OR51B4Q9Y5P0 310 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 SCINQ9Y6U3 715 aa13.71□□□□□ -0.21
NUP188-211ENST00000550219 PLXNB3Q9ULL4 1909 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 A0A0U1RQJ8 604 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 TMEM191CA6NGB0 347 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 I6L893 689 aaPredicted RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 K7ERQ8 282 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 TLR4O00206 839 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 ALOX15BO15296 676 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 YKT6O15498 198 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 LATO43561 262 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 SDC3O75056 442 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 LDOC1O95751 146 aaPredicted RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 MT-CO1P00395 513 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 CAPNS1P04632 268 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 KRT3P12035 628 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 PRLRP16471 622 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 FLT3P36888 993 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 ARHGAP25P42331 645 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 CXCR3P49682 368 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 HADHBP55084 474 aaKnown RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 SETMARQ53H47 684 aaPredicted RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 LRRC31Q6UY01 552 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 KIAA1328Q86T90 577 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 FAM131BQ86XD5 332 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 RHOT2Q8IXI1 618 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 SAP25Q8TEE9 199 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 C2orf49Q9BVC5 232 aaPredicted RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 SELENOOQ9BVL4 669 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 TNKS2Q9H2K2 1166 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 MRPL47Q9HD33 250 aaKnown RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 FZD3Q9NPG1 666 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 METTL5Q9NRN9 209 aaKnown RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 MYO1AQ9UBC5 1043 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 PPM1HQ9ULR3 514 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 TFR2Q9UP52 801 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 TBC1D30Q9Y2I9 924 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
NUP188-211ENST00000550219 PAXBP1Q9Y5B6 917 aa13.7□□□□□ -0.22
NUP188-211ENST00000550219 COL5A1P20908 1838 aaPredicted RBP13.69□□□□□ -0.22
NUP188-211ENST00000550219 A0A0D9SEW6 157 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 C2CD4BA6NLJ0 364 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 C10orf142B7Z368 130 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 E9PAM4 449 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 MCF2LO15068 1137 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 RNGTTO60942 597 aaKnown RBP13.69□□□□□ -0.22
NUP188-211ENST00000550219 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 RFPL3O75679 317 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 ENDOD1O94919 500 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 GJB6O95452 261 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms