RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 NSUN2Q08J23 767 aaKnown RBP eCLIP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 FAM46CQ5VWP2 391 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 ALG1LQ6GMV1 187 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 KIAA1324Q6UXG2 1013 aaKnown RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 SPOCD1Q6ZMY3 1216 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 DPY19L3Q6ZPD9 716 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 ARHGAP36Q6ZRI8 547 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 SYCE1Q8N0S2 351 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 AADATQ8N5Z0 425 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 FAM160A2Q8N612 972 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 CADM4Q8NFZ8 388 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 KIAA1524Q8TCG1 905 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 KRT35Q92764 455 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 ZNF419Q96HQ0 510 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 HES6Q96HZ4 224 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 RBM41Q96IZ5 413 aaKnown RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 PSKH2Q96QS6 385 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 CPEB1Q9BZB8 566 aaKnown RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 KCNF1Q9H3M0 494 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 KDM4CQ9H3R0 1056 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 SGK2Q9HBY8 427 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 DTLQ9NZJ0 730 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 SARDHQ9UL12 918 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 PCDHGA5Q9Y5G8 931 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 TP53BP1Q12888 1972 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-208ENST00000549995 NUMA1Q14980 2115 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 TSPAN11A1L157 253 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 C1QTNF3-AMACRE9PGA6 284 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 MID1O15344 667 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 PALMO75781 387 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 RHOBTB1O94844 696 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 RETP07949 1114 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 CR2P20023 1033 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 MX2P20592 715 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 CCNCP24863 283 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 SLC8A1P32418 973 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 HOXD12P35452 270 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 HSPA9P38646 679 aaKnown RBP12.1□□□□□ -0.47
PFDN5-208ENST00000549995 DPP6P42658 865 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 GBE1Q04446 702 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 SLC10A2Q12908 348 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-208ENST00000549995 HNRNPDQ14103 355 aaKnown RBP12.1□□□□□ -0.47
PFDN5-208ENST00000549995 ACCSLQ4AC99 568 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 TFDP3Q5H9I0 405 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 ASCL5Q7RTU5 278 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 MMAAQ8IVH4 418 aaKnown RBP12.1□□□□□ -0.47
PFDN5-208ENST00000549995 RCOR2Q8IZ40 523 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 PGBD3Q8N328 593 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 FRMD1Q8N878 549 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 HCAR2Q8TDS4 363 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 GDAP1L1Q96MZ0 367 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 HEPHQ9BQS7 1158 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 HDAC8Q9BY41 377 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 SERGEFQ9UGK8 458 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 IL36AQ9UHA7 158 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
PFDN5-208ENST00000549995 CYP8B1Q9UNU6 501 aa12.1□□□□□ -0.47
PFDN5-208ENST00000549995 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-208ENST00000549995 CACNA1EQ15878 2313 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 MACROD2A1Z1Q3 448 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 DFFAO00273 331 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
PFDN5-208ENST00000549995 PLRG1O43660 514 aaKnown RBP12.09□□□□□ -0.47
PFDN5-208ENST00000549995 ZRANB2O95218 330 aaKnown RBP eCLIP12.09□□□□□ -0.47
PFDN5-208ENST00000549995 POP4O95707 220 aaKnown RBP12.09□□□□□ -0.47
PFDN5-208ENST00000549995 IGSF6O95976 241 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 ACADMP11310 421 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 TGM2P21980 687 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 ITGB7P26010 798 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 NR2C2P49116 596 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 PPIDQ08752 370 aaKnown RBP12.09□□□□□ -0.47
PFDN5-208ENST00000549995 TFDP2Q14188 446 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 GRM3Q14832 879 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 ELF2Q15723 593 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 PIP5KL1Q5T9C9 394 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 AGBL4Q5VU57 503 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 CEP68Q76N32 757 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 SLC41A1Q8IVJ1 513 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 DNASE2BQ8WZ79 361 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 ALG3Q92685 438 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 ARRDC3Q96B67 414 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 FAM122AQ96E09 287 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 TOE1Q96GM8 510 aaKnown RBP12.09□□□□□ -0.47
PFDN5-208ENST00000549995 TUBGCP5Q96RT8 1024 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 MGME1Q9BQP7 344 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 BRD8Q9H0E9 1235 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 TNKS2Q9H2K2 1166 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 SP110Q9HB58 689 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 HECAQ9UBI9 543 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-208ENST00000549995 SEPT3Q9UH03 358 aa12.09□□□□□ -0.47
PFDN5-208ENST00000549995 AMFRQ9UKV5 643 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms