RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 FAM72AQ5TYM5 149 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 FAM72DQ6L9T8 149 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 FBXL19Q6PCT2 694 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 UNQ6494/PRO21346Q6UXR6 183 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 RAB44Q7Z6P3 723 aaPredicted RBP11.61□□□□□ -0.55
BEST3-209ENST00000548658 FAM72BQ86X60 149 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 RTL3Q8N8U3 475 aaKnown RBP11.61□□□□□ -0.55
BEST3-209ENST00000548658 BAHD1Q8TBE0 780 aaPredicted RBP11.61□□□□□ -0.55
BEST3-209ENST00000548658 ARHGEF2Q92974 986 aaKnown RBP11.61□□□□□ -0.55
BEST3-209ENST00000548658 IQCDQ96DY2 449 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 SYT11Q9BT88 431 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 RAB6CQ9H0N0 254 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 TNKS2Q9H2K2 1166 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 HAUS4Q9H6D7 363 aa11.61□□□□□ -0.55
BEST3-209ENST00000548658 HECAQ9UBI9 543 aaPredicted RBP11.61□□□□□ -0.55
BEST3-209ENST00000548658 BZW2Q9Y6E2 419 aaKnown RBP11.61□□□□□ -0.55
BEST3-209ENST00000548658 NYNRINQ9P2P1 1898 aaKnown RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 PLK4O00444 970 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 KCNK3O14649 394 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 FGF10O15520 208 aaPredicted RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 CCP110O43303 1012 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 HYAL3O43820 417 aaPredicted RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 ZNF821O75541 412 aaPredicted RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 RNF8O76064 485 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 PCDH8O95206 1070 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 POP4O95707 220 aaKnown RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 ITGAVP06756 1048 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 MYBL1P10243 752 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 CDK4P11802 303 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 ITGB7P26010 798 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 MAT2AP31153 395 aaKnown RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 RXRGP48443 463 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 CCNHP51946 323 aaPredicted RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 NEK3P51956 506 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 NXPH1P58417 271 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 TAS2R38P59533 333 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 PPP2CBP62714 309 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 PPP2CAP67775 309 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 RAD51Q06609 339 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 KLHL30Q0D2K2 578 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 MAMLD1Q13495 774 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 IQCB1Q15051 598 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 PARP15Q460N3 678 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 INO80DQ53TQ3 878 aaPredicted RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 KCNT1Q5JUK3 1230 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 PLEKHA7Q6IQ23 1121 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 LAYNQ6UX15 382 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 TMC6Q7Z403 805 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 VPS36Q86VN1 386 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 HORMAD1Q86X24 394 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 ZNF354CQ86Y25 554 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 CHST14Q8NCH0 376 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 OR2AP1Q8NGE2 309 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 GRIN3AQ8TCU5 1115 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 FNIP1Q8TF40 1166 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 RAB7BQ96AH8 199 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 ARHGEF26Q96DR7 871 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 TRIM11Q96F44 468 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 KLHDC7BQ96G42 594 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 FEM1CQ96JP0 617 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 FUCA2Q9BTY2 467 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 OSBPL1AQ9BXW6 950 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 MRPL47Q9HD33 250 aaKnown RBP11.6□□□□□ -0.55
BEST3-209ENST00000548658 FZD10Q9ULW2 581 aa11.6□□□□□ -0.55
BEST3-209ENST00000548658 A0A1W2PQU0 124 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 SYCE3A1L190 88 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 WASH4PA8MWX3 477 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 TMCO5BA8MYB1 307 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 GOLGA6L19H0YKK7 550 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 BUB1O43683 1085 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 AP1G1O43747 822 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 CREB3O43889 395 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 GSRP00390 522 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 FTLP02792 175 aaPredicted RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 WNT1P04628 370 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 SPINK2P20155 84 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 PSMA2P25787 234 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 AKT2P31751 481 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 ACVRL1P37023 503 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 ZNF135P52742 658 aaPredicted RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 RPS21P63220 83 aaKnown RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 KIAA1161Q6NSJ0 714 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 PSTKQ8IV42 348 aaKnown RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 UMODL1-AS1Q8N2C9 162 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 RYBPQ8N488 228 aaPredicted RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 CHCHD4Q8N4Q1 142 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 KDF1Q8NAX2 398 aaPredicted RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 SYN2Q92777 582 aaPredicted RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 ARRDC3Q96B67 414 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 NAP1L5Q96NT1 182 aaPredicted RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 NDFIP2Q9NV92 336 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 FCF1Q9Y324 198 aaKnown RBP11.59□□□□□ -0.55
BEST3-209ENST00000548658 SCINQ9Y6U3 715 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 WASF2Q9Y6W5 498 aa11.59□□□□□ -0.55
BEST3-209ENST00000548658 A0A1W2PQJ5 194 aa11.58□□□□□ -0.56
BEST3-209ENST00000548658 TMEM191CA6NGB0 347 aa11.58□□□□□ -0.56
BEST3-209ENST00000548658 WNT9AO14904 365 aa11.58□□□□□ -0.56
BEST3-209ENST00000548658 SLC31A1O15431 190 aa11.58□□□□□ -0.56
BEST3-209ENST00000548658 TSPAN6O43657 245 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms