RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PHLDB2Q86SQ0 1253 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 PDCD7Q8N8D1 485 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 OR13H1Q8NG92 308 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 KLHDC7BQ96G42 594 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 PCDHB18PQ96TA0 734 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 FANCLQ9NW38 375 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 OR12D3Q9UGF7 316 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 CXorf51AA0A1B0GTR3 108 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 FAM72CH0Y354 149 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 CDK4P11802 303 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 ADRB3P13945 408 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 RHOQP17081 205 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 AKT2P31751 481 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 HNF1BP35680 557 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 MAPKAPK2P49137 400 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 COPB1P53618 953 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 HDAC4P56524 1084 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 SLC20A2Q08357 652 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 ARL13BQ3SXY8 428 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 FAM72AQ5TYM5 149 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 FAM72DQ6L9T8 149 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 FBXL19Q6PCT2 694 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 C19orf48Q6RUI8 117 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 PARS2Q7L3T8 475 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 ABI3BPQ7Z7G0 1075 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 FAM72BQ86X60 149 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 SLC22A18ASQ8N1D0 253 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 CCDC185Q8N715 623 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 CENPIQ92674 756 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 HEPHQ9BQS7 1158 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 OSBPL2Q9H1P3 480 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 CAAP1Q9H8G2 361 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 GPR27Q9NS67 375 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 TMEM248Q9NWD8 314 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 IGSF10Q6WRI0 2623 aa17.73■□□□□ 0.43
CHMP1A-205ENST00000548650 LGALS16A8MUM7 142 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 TRIM38O00635 465 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 LRIG2O94898 1065 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 PCDH8O95206 1070 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 TPM2P07951 284 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 CKMT2P17540 419 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 ETFBP38117 255 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 STAT1P42224 750 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 NSFP46459 744 aaKnown RBP17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 CLDN2P57739 230 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 FGL2Q14314 439 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 SYCP1Q15431 976 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 COL28A1Q2UY09 1125 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 CARD16Q5EG05 197 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 HES3Q5TGS1 186 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 PHF13Q86YI8 300 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 SLC25A45Q8N413 288 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 FAM172AQ8WUF8 416 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 ARHGEF2Q92974 986 aaKnown RBP17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 NTAN1Q96AB6 310 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 VOPP1Q96AW1 172 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 NXPE2Q96DL1 559 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 CALN1Q9BXU9 219 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 MAGEB5Q9BZ81 275 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 TM6SF2Q9BZW4 377 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 ZDHHC6Q9H6R6 413 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 SCUBE2Q9NQ36 999 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 KLHL11Q9NVR0 708 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 FADS3Q9Y5Q0 445 aa17.72■□□□□ 0.43
CHMP1A-205ENST00000548650 SIGLEC6O43699 453 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 DGKAP23743 735 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 ACP1P24666 158 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 L1CAMP32004 1257 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 RFC1P35251 1148 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 ILKQ13418 452 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 CLEC16AQ2KHT3 1053 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 KIAA1161Q6NSJ0 714 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 RWDD4Q6NW29 188 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 MON1BQ7L1V2 547 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 C3orf20Q8ND61 904 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 OR6K2Q8NGY2 324 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 ISG20Q96AZ6 181 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 TBC1D31Q96DN5 1066 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 RETREG1Q9H6L5 497 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 UCKL1Q9NWZ5 548 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 ADAM22Q9P0K1 906 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 LIMA1Q9UHB6 759 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 DNAI1Q9UI46 699 aa17.71■□□□□ 0.43
CHMP1A-205ENST00000548650 TCRBV5S1A1TA0A578 114 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 A6NNZ2 444 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 SPINT1O43278 529 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 AP1G1O43747 822 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 PIAS2O75928 621 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 PLEKP08567 350 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 GIMD1P0DJR0 217 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 KRT3P12035 628 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 GKP32189 559 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 ABL2P42684 1182 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 DNA2P51530 1060 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 RPS21P63220 83 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 MYL5Q02045 173 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 ZNF211Q13398 564 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 KYAT3Q6YP21 454 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 PDZD3Q86UT5 571 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 PLPP6Q8IY26 295 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms