RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ZNF212Q9UDV6 495 aa16.81■□□□□ 0.28
SSH1-208ENST00000548522 FARP1Q9Y4F1 1045 aaPredicted RBP16.81■□□□□ 0.28
SSH1-208ENST00000548522 COL27A1Q8IZC6 1860 aaPredicted RBP16.81■□□□□ 0.28
SSH1-208ENST00000548522 PYCARD-AS1I3L0S3 204 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 ERVH48-1M5A8F1 160 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 SPINT1O43278 529 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 PAK4O96013 591 aaPredicted RBP16.8■□□□□ 0.28
SSH1-208ENST00000548522 ALPPL2P10696 532 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 ADRB3P13945 408 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 NME1P15531 152 aaKnown RBP16.8■□□□□ 0.28
SSH1-208ENST00000548522 LSSP48449 732 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 TMPRSS3P57727 454 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 TAF1BQ53T94 588 aaPredicted RBP16.8■□□□□ 0.28
SSH1-208ENST00000548522 C3orf38Q5JPI3 329 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 KYAT3Q6YP21 454 aaKnown RBP16.8■□□□□ 0.28
SSH1-208ENST00000548522 PARS2Q7L3T8 475 aaKnown RBP16.8■□□□□ 0.28
SSH1-208ENST00000548522 ELOA2Q8IYF1 753 aaPredicted RBP16.8■□□□□ 0.28
SSH1-208ENST00000548522 FAM181AQ8N9Y4 354 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 ZNF397Q8NF99 534 aaPredicted RBP16.8■□□□□ 0.28
SSH1-208ENST00000548522 KCNE4Q8WWG9 221 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 VCPIP1Q96JH7 1222 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 WDCPQ9H6R7 721 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 SYNCQ9H7C4 482 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 POLR1BQ9H9Y6 1135 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 SIX2Q9NPC8 291 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 GGT7Q9UJ14 662 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 SATB2Q9UPW6 733 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 ITM2BQ9Y287 266 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 FCF1Q9Y324 198 aaKnown RBP16.8■□□□□ 0.28
SSH1-208ENST00000548522 FADS3Q9Y5Q0 445 aa16.8■□□□□ 0.28
SSH1-208ENST00000548522 DRGXA6NNA5 263 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 KLK10O43240 276 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 ZMPSTE24O75844 475 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 CSF2P04141 144 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 GP1BAP07359 652 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 KRT10P13645 584 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 PON1P27169 355 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 GKP32189 559 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 SERPINH1P50454 418 aaKnown RBP16.79■□□□□ 0.28
SSH1-208ENST00000548522 CLCN6P51797 869 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 NEK3P51956 506 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 ARF5P84085 180 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 C1QBPQ07021 282 aaKnown RBP16.79■□□□□ 0.28
SSH1-208ENST00000548522 LY6DQ14210 128 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 ISXQ2M1V0 245 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 DEFB133Q30KQ1 61 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 C2CD6Q53TS8 623 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 TRNP1Q6NT89 227 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 SETD3Q86TU7 594 aaPredicted RBP16.79■□□□□ 0.28
SSH1-208ENST00000548522 PARGQ86W56 976 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 GAS2L3Q86XJ1 694 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 CREBRFQ8IUR6 639 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 OR6K2Q8NGY2 324 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 COL26A1Q96A83 441 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 IFT43Q96FT9 208 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 ATXN7L3BQ96GX2 97 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 KLF6Q99612 283 aaPredicted RBP16.79■□□□□ 0.28
SSH1-208ENST00000548522 SPON2Q9BUD6 331 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 SLC17A9Q9BYT1 436 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 ABCG4Q9H172 646 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 TCEAL2Q9H3H9 227 aaPredicted RBP16.79■□□□□ 0.28
SSH1-208ENST00000548522 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSH1-208ENST00000548522 PNMA8BQ9ULN7 279 aaPredicted RBP16.79■□□□□ 0.28
SSH1-208ENST00000548522 PIEZO2Q9H5I5 2752 aa16.79■□□□□ 0.28
SSH1-208ENST00000548522 TDRD6O60522 2096 aaKnown RBP16.78■□□□□ 0.28
SSH1-208ENST00000548522 BOD1L1Q8NFC6 3051 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 IGLV3-10A0A075B6K4 115 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 SPTY2D1-AS1A0A0U1RR47 76 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 CPED1A4D0V7 1026 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 SRGAP2O75044 1071 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
SSH1-208ENST00000548522 ITGB7P26010 798 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 OR1E1P30953 314 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 CLCN1P35523 988 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 FLT3P36888 993 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 ABL2P42684 1182 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 RECQLP46063 649 aaPredicted RBP16.78■□□□□ 0.28
SSH1-208ENST00000548522 DNA2P51530 1060 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 CCNHP51946 323 aaPredicted RBP16.78■□□□□ 0.28
SSH1-208ENST00000548522 ERVPABLB-1P60509 514 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 HNRNPKP61978 463 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■■■■ 27.1
SSH1-208ENST00000548522 RPS21P63220 83 aaKnown RBP16.78■□□□□ 0.28
SSH1-208ENST00000548522 DEUP1Q05D60 604 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 MTA1Q13330 715 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 PDE1CQ14123 709 aaPredicted RBP16.78■□□□□ 0.28
SSH1-208ENST00000548522 EXOC3L4Q17RC7 722 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 BRMS1LQ5PSV4 323 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 GBP6Q6ZN66 633 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 EFL1Q7Z2Z2 1120 aaKnown RBP16.78■□□□□ 0.28
SSH1-208ENST00000548522 RBFAQ8N0V3 343 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 NT5C3BQ969T7 300 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 VOPP1Q96AW1 172 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 PPP1R16AQ96I34 528 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 TM6SF2Q9BZW4 377 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 MYO18BQ8IUG5 2567 aa16.78■□□□□ 0.28
SSH1-208ENST00000548522 NEMP2A6NFY4 417 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 IGLON5A6NGN9 336 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 FOXN3O00409 490 aaPredicted RBP16.77■□□□□ 0.28
SSH1-208ENST00000548522 LZTS3O60299 673 aaPredicted RBP16.77■□□□□ 0.28
SSH1-208ENST00000548522 CD160O95971 181 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms