RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 NR1H3Q13133 447 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 SPARCL1Q14515 664 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 DMC1Q14565 340 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 RASA2Q15283 850 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 RALGPS1Q5JS13 557 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 FYB2Q5VWT5 728 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 STEAP4Q687X5 459 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 CES5AQ6NT32 575 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 CAPN12Q6ZSI9 719 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 NPAS3Q8IXF0 933 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 IPMKQ8NFU5 416 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 OR52K2Q8NGK3 314 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 OR52K1Q8NGK4 314 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 SPATA22Q8NHS9 363 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 GSDMBQ8TAX9 411 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 EPS8L3Q8TE67 593 aaKnown RBP12.56□□□□□ -0.4
RAB5B-204ENST00000548068 PTCD2Q8WV60 388 aaKnown RBP12.56□□□□□ -0.4
RAB5B-204ENST00000548068 SMARCD2Q92925 531 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 IRF7Q92985 503 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 E2F7Q96AV8 911 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 ZNF419Q96HQ0 510 aaPredicted RBP12.56□□□□□ -0.4
RAB5B-204ENST00000548068 WDR83Q9BRX9 315 aaKnown RBP12.56□□□□□ -0.4
RAB5B-204ENST00000548068 FICDQ9BVA6 458 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 SLC2A11Q9BYW1 496 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 ZNF576Q9H609 170 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 UBP1Q9NZI7 540 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 MARK1Q9P0L2 795 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 LGALS13Q9UHV8 139 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 OR51B4Q9Y5P0 310 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 IKBKGQ9Y6K9 419 aa12.56□□□□□ -0.4
RAB5B-204ENST00000548068 CHD7Q9P2D1 2997 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 KIF26AQ9ULI4 1882 aaPredicted RBP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 SMIM23A6NLE4 172 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 RRP9O43818 475 aaKnown RBP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 PMPCBO75439 489 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 GLP2RO95838 553 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 MT-CYBP00156 380 aaPredicted RBP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 ADH1CP00326 375 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 MZF1P28698 734 aaPredicted RBP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 SSTR1P30872 391 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 ADRA1AP35348 466 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 CD86P42081 329 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 GRIA1P42261 906 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 WNT3AP56704 352 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 DSC2Q02487 901 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 SLC20A2Q08357 652 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 MTM1Q13496 603 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 NAB1Q13506 487 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 LAMB3Q13751 1172 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 TTMPQ5BVD1 217 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 FSCBQ5H9T9 825 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 SPANXN3Q5MJ09 141 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 FAM182AQ5T1J6 154 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 UBAP2Q5T6F2 1119 aaKnown RBP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 ZNF449Q6P9G9 518 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 POTEHQ6S545 545 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 KDELC1Q6UW63 502 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 CYS1Q717R9 158 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 TAOK1Q7L7X3 1001 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 IGDCC3Q8IVU1 814 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 ARFGAP2Q8N6H7 521 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 FAM76AQ8TAV0 307 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 FBF1Q8TES7 1133 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 BHMTQ93088 406 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 ARL8AQ96BM9 186 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 TADA1Q96BN2 335 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 FEM1CQ96JP0 617 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 RIPOR3Q96MK2 946 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 ZSWIM3Q96MP5 696 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 ASB16Q96NS5 453 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 XPO6Q96QU8 1125 aaKnown RBP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 SEMA3CQ99985 751 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 BBS2Q9BXC9 721 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 TRPV4Q9HBA0 871 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 ARNT2Q9HBZ2 717 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 THG1LQ9NWX6 298 aaKnown RBP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 SYBUQ9NX95 663 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 VPS18Q9P253 973 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 PSMC3IPQ9P2W1 217 aaPredicted RBP12.55□□□□□ -0.4
RAB5B-204ENST00000548068 VPS51Q9UID3 782 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
RAB5B-204ENST00000548068 FAM237BA0A1B0GVD1 139 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 TCRBV9S1A1TA0A576 114 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 NEDD8-MDP1E9PL57 170 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 USP12O75317 370 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 ZMPSTE24O75844 475 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 TMCC1O94876 653 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 NFATC1O95644 943 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 EPOP01588 193 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 HLA-DPA1P20036 260 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 PRKCHP24723 683 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 MSH2P43246 934 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 MAPK8P45983 427 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 MAXP61244 160 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 ARF5P84085 180 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 SKOR1P84550 965 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 SULT2A1Q06520 285 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms