RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 NEK11Q8NG66 645 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 JOSD2Q8TAC2 188 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 BAHD1Q8TBE0 780 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 GRIN3AQ8TCU5 1115 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ARRDC3Q96B67 414 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 KLHDC7BQ96G42 594 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 PCDHB18PQ96TA0 734 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 MYOCQ99972 504 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ZYG11BQ9C0D3 744 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 KDM4CQ9H3R0 1056 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ATP13A1Q9HD20 1204 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 DYRK4Q9NR20 520 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ANO10Q9NW15 660 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ADAM22Q9P0K1 906 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 FTSJ1Q9UET6 329 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 IL36AQ9UHA7 158 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 LIMA1Q9UHB6 759 aaKnown RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 DNAI1Q9UI46 699 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 TPX2Q9ULW0 747 aaKnown RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 DMTF1Q9Y222 760 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 SIK3Q9Y2K2 1263 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ACTL7AQ9Y615 435 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 C2CD4BA6NLJ0 364 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 LGALS16A8MUM7 142 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 C10orf142B7Z368 130 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 FAM72CH0Y354 149 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 PRAMEF26H0Y7S4 382 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 GOLGA6L22H0YM25 854 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 ENC1O14682 589 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 CAPN5O15484 640 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 MAGEC1O60732 1142 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 LEFTY1O75610 366 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 ZMPSTE24O75844 475 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 PRNPP04156 253 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 PLEKP08567 350 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 UNGP13051 313 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 GKP32189 559 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 RFC1P35251 1148 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 NSFP46459 744 aaKnown RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 JAM2P57087 298 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 CLDN2P57739 230 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 MYL5Q02045 173 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 SLC20A2Q08357 652 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 DNAJC3Q13217 504 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 STX1AQ16623 288 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 CLEC16AQ2KHT3 1053 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 CARD16Q5EG05 197 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 ARTNQ5T4W7 220 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 PIP5KL1Q5T9C9 394 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 FAM72AQ5TYM5 149 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 FAM72DQ6L9T8 149 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 SCYL2Q6P3W7 929 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 C22orf39Q6P5X5 142 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 FBXL19Q6PCT2 694 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 TRIM72Q6ZMU5 477 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 RBM43Q6ZSC3 357 aaKnown RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 ERN2Q76MJ5 926 aaKnown RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 ARCQ7LC44 396 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 TMPRSS7Q7RTY8 843 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 BNIPLQ7Z465 357 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 TRIM69Q86WT6 500 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 FAM72BQ86X60 149 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 ZNF354CQ86Y25 554 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 GALNT15Q8N3T1 639 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 DCAF4L2Q8NA75 395 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 MDM1Q8TC05 714 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 SAP25Q8TEE9 199 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 FAM172AQ8WUF8 416 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 CNDP2Q96KP4 475 aaKnown RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 HEPHQ9BQS7 1158 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 SELENOOQ9BVL4 669 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 OSBPL2Q9H1P3 480 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 CCDC86Q9H6F5 360 aaKnown RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 PREBQ9HCU5 417 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 FZD3Q9NPG1 666 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 NDFIP2Q9NV92 336 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 HECAQ9UBI9 543 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 PPARGC1AQ9UBK2 798 aaKnown RBP6.84□□□□□ -1.31
SCAF11-211ENST00000547950 HPCAL4Q9UM19 191 aa6.84□□□□□ -1.31
SCAF11-211ENST00000547950 NUP205Q92621 2012 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 PCDH15Q96QU1 1955 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ANKRD62A6NC57 917 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 TRABD2BA6NFA1 517 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 LRRC10BA6NIK2 292 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 NEMP1O14524 444 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 TERTO14746 1132 aaKnown RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 SDC3O75056 442 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF821O75541 412 aaPredicted RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 LRIG2O94898 1065 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 DKK1O94907 266 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 PAK4O96013 591 aaPredicted RBP6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CAPNS1P04632 268 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 CALB1P05937 261 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 THEGLP0DJG4 465 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 ATP1A3P13637 1013 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 JUPP14923 745 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 RHOQP17081 205 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 TNFAIP3P21580 790 aa6.83□□□□□ -1.32
SCAF11-211ENST00000547950 GPD1P21695 349 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms