RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 KRT4P19013 534 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 HLA-DPA1P20036 260 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 SPRP35270 261 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 ADRA1AP35348 466 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 CCT5P48643 541 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 ERVK-21P61565 698 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 NSUN2Q08J23 767 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 SLC10A7Q0GE19 358 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 HHATQ5VTY9 493 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 RNF219Q5W0B1 726 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 RETSATQ6NUM9 610 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 MICALCLQ6ZW33 695 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 GAREM2Q75VX8 874 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 CPLX4Q7Z7G2 160 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 LMNTD2Q8IXW0 634 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 PEX13Q92968 403 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 PPP2R3CQ969Q6 453 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 OTUB2Q96DC9 234 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 MRRFQ96E11 262 aaKnown RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 CHMP6Q96FZ7 201 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 CERS2Q96G23 380 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 OXNAD1Q96HP4 312 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 FEM1CQ96JP0 617 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 CABS1Q96KC9 395 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 PSKH2Q96QS6 385 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 CYP2S1Q96SQ9 504 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 FICDQ9BVA6 458 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 C2orf49Q9BVC5 232 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 SMPD4Q9NXE4 827 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 KIAA1522Q9P206 1035 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 CTNNAL1Q9UBT7 734 aa13.64□□□□□ -0.23
PTCH1-215ENST00000547672 MTCL1Q9Y4B5 1905 aaKnown RBP13.64□□□□□ -0.23
PTCH1-215ENST00000547672 F5H423 210 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 CCL16O15467 120 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 TIMM44O43615 452 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 ATP9BO43861 1147 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 LUC7L3O95232 432 aaKnown RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 GP5P40197 560 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 MAPK8P45983 427 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 SERPINH1P50454 418 aaKnown RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 CSE1LP55060 971 aaKnown RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 RPS24P62847 133 aaKnown RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 GPM6BQ13491 265 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 CDH18Q13634 790 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 STXBP5Q5T5C0 1151 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 ALG1LQ6GMV1 187 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 TAX1BP1Q86VP1 789 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 RASSF3Q86WH2 238 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 TRIM42Q8IWZ5 723 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 AGGF1Q8N302 714 aaeCLIP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 MPP5Q8N3R9 675 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 CARNMT1Q8N4J0 409 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 TDRD5Q8NAT2 981 aaKnown RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 SPATA22Q8NHS9 363 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 DDI1Q8WTU0 396 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 ACDQ96AP0 544 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 TADA1Q96BN2 335 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 ZNF669Q96BR6 464 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
PTCH1-215ENST00000547672 GORASP1Q9BQQ3 440 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 MAN1C1Q9NR34 630 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 UBP1Q9NZI7 540 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 CFAP97Q9P2B7 532 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 PRKAG3Q9UGI9 489 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
PTCH1-215ENST00000547672 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 A0A1W2PRU2 124 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 LCHNA4D1U4 455 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 HIDE1A8MVS5 230 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 TSPAN3O60637 253 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 CLASP2O75122 1294 aaKnown RBP13.62□□□□□ -0.23
PTCH1-215ENST00000547672 USP12O75317 370 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 FGF1P05230 155 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 TCF3P15923 654 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 ACVRL1P37023 503 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 CD86P42081 329 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 PDE1BQ01064 536 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 SLC18A2Q05940 514 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 NIPAL4Q0D2K0 466 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 MTM1Q13496 603 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 CERCAMQ5T4B2 595 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 GPR158Q5T848 1215 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 FYB2Q5VWT5 728 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 KDELC1Q6UW63 502 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 PRPF39Q86UA1 669 aaKnown RBP13.62□□□□□ -0.23
PTCH1-215ENST00000547672 LCA5Q86VQ0 697 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 CIR1Q86X95 450 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-215ENST00000547672 HS6ST3Q8IZP7 471 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 CMTM8Q8IZV2 173 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 ANKRD42Q8N9B4 389 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 MDM1Q8TC05 714 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 SLC22A17Q8WUG5 538 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 CKAP2Q8WWK9 683 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 ATXN2LQ8WWM7 1075 aaKnown RBP13.62□□□□□ -0.23
PTCH1-215ENST00000547672 GRAMD1AQ96CP6 724 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 MRGPRX2Q96LB1 330 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 MAGEB18Q96M61 343 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 CCT8L2Q96SF2 557 aa13.62□□□□□ -0.23
PTCH1-215ENST00000547672 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms