RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 HSPA1AP0DMV8 641 aaKnown RBP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 HSPA1BP0DMV9 641 aaKnown RBP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 SLC2A4P14672 509 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 FMO4P31512 558 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 TSPAN7P41732 249 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 DPP6P42658 865 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 GPR12P47775 334 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 HARS2P49590 506 aaKnown RBP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 BLKP51451 505 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 UFM1P61960 85 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 VEPH1Q14D04 833 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 ME3Q16798 604 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 SYTL3Q4VX76 610 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 UBAP2Q5T6F2 1119 aaKnown RBP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 FAM180BQ6P0A1 224 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 TMEM81Q6P7N7 255 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 PRSS45Q7RTY3 260 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 KDELC2Q7Z4H8 507 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 CPLX4Q7Z7G2 160 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 FAM217AQ8IXS0 508 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 C11orf65Q8NCR3 313 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 ATOH1Q92858 354 aaPredicted RBP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 CLSTN3Q9BQT9 956 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 ZDHHC7Q9NXF8 308 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 TUBA8Q9NY65 449 aaPredicted RBP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 MPP6Q9NZW5 540 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 SLC25A10Q9UBX3 287 aaPredicted RBP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 AASSQ9UDR5 926 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 SARDHQ9UL12 918 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 CLDN16Q9Y5I7 305 aa6.51□□□□□ -1.37
NPAS3-204ENST00000546849 POLR2AP24928 1970 aaKnown RBP6.51□□□□□ -1.37
NPAS3-204ENST00000546849 RIMBP3CA6NJZ7 1639 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 RIMBP3BA6NNM3 1639 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 RIMBP3Q9UFD9 1639 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 A0A0A0MQY5 61 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 TYW5A2RUC4 315 aaKnown RBP6.5□□□□□ -1.37
NPAS3-204ENST00000546849 PABPN1LA6NDY0 278 aaKnown RBP6.5□□□□□ -1.37
NPAS3-204ENST00000546849 MMP3P08254 477 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 ABCD1P33897 745 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 MAN1A1P33908 653 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 CCT4P50991 539 aaKnown RBP6.5□□□□□ -1.37
NPAS3-204ENST00000546849 C21orf58P58505 322 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 INPP5JQ15735 1006 aaPredicted RBP6.5□□□□□ -1.37
NPAS3-204ENST00000546849 RPE65Q16518 533 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 PIK3CD-AS1Q5SR53 167 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 FAM160B2Q86V87 743 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 TMC8Q8IU68 726 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 LURAP1LQ8IV03 231 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 SRRM1Q8IYB3 904 aaKnown RBP6.5□□□□□ -1.37
NPAS3-204ENST00000546849 HORMAD2Q8N7B1 307 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 ZNF333Q96JL9 665 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 C7orf26Q96N11 449 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 KRT84Q9NSB2 600 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 ORC3Q9UBD5 711 aaPredicted RBP6.5□□□□□ -1.37
NPAS3-204ENST00000546849 COG5Q9UP83 839 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 ZNF804BA4D1E1 1349 aa6.5□□□□□ -1.37
NPAS3-204ENST00000546849 DDTLA6NHG4 134 aaPredicted RBP6.49□□□□□ -1.37
NPAS3-204ENST00000546849 FGBP02675 491 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 GALTP07902 379 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 IRF1P10914 325 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 CHRNB1P11230 501 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 ALDH7A1P49419 539 aaKnown RBP6.49□□□□□ -1.37
NPAS3-204ENST00000546849 MTX1Q13505 466 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 TAF11Q15544 211 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 MAPRE1Q15691 268 aaKnown RBP6.49□□□□□ -1.37
NPAS3-204ENST00000546849 TSTQ16762 297 aaKnown RBP6.49□□□□□ -1.37
NPAS3-204ENST00000546849 ZNF667Q5HYK9 610 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 C10orf25Q5T742 122 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 WDR78Q5VTH9 848 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 NCAPH2Q6IBW4 605 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 MOB3CQ70IA8 216 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 MRPL10Q7Z7H8 261 aaKnown RBP6.49□□□□□ -1.37
NPAS3-204ENST00000546849 SERPINA11Q86U17 422 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 GPAT4Q86UL3 456 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 PALB2Q86YC2 1186 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 RASSF8Q8NHQ8 419 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 MPLKIPQ8TAP9 179 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 RPL36ALQ969Q0 106 aaKnown RBP6.49□□□□□ -1.37
NPAS3-204ENST00000546849 SPAG4Q9NPE6 437 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 SEMA4BQ9NPR2 832 aaPredicted RBP6.49□□□□□ -1.37
NPAS3-204ENST00000546849 SNTG1Q9NSN8 517 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 TBC1D14Q9P2M4 693 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 HS3ST3B1Q9Y662 390 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 MST1RQ04912 1400 aa6.49□□□□□ -1.37
NPAS3-204ENST00000546849 TRBV5-7A0A0A0MS05 114 aa6.48□□□□□ -1.37
NPAS3-204ENST00000546849 FAM157AC9JC47 383 aa6.48□□□□□ -1.37
NPAS3-204ENST00000546849 UNGP13051 313 aaPredicted RBP6.48□□□□□ -1.37
NPAS3-204ENST00000546849 EIF3BP55884 814 aaKnown RBP6.48□□□□□ -1.37
NPAS3-204ENST00000546849 RBMS2Q15434 407 aaKnown RBP6.48□□□□□ -1.37
NPAS3-204ENST00000546849 MANEAQ5SRI9 462 aa6.48□□□□□ -1.37
NPAS3-204ENST00000546849 SERTAD4-AS1Q5TG53 156 aa6.48□□□□□ -1.37
NPAS3-204ENST00000546849 C17orf99Q6UX52 265 aa6.48□□□□□ -1.37
NPAS3-204ENST00000546849 C4orf50Q6ZRC1 276 aa6.48□□□□□ -1.37
NPAS3-204ENST00000546849 H1FNTQ75WM6 255 aaPredicted RBP6.48□□□□□ -1.37
NPAS3-204ENST00000546849 TDRD7Q8NHU6 1098 aaKnown RBP6.48□□□□□ -1.37
NPAS3-204ENST00000546849 C16orf52Q8NHV5 167 aa6.48□□□□□ -1.37
NPAS3-204ENST00000546849 LPAR1Q92633 364 aa6.48□□□□□ -1.37
NPAS3-204ENST00000546849 KLHL15Q96M94 604 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms