RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 BNIPLQ7Z465 357 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ARPINQ7Z6K5 226 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TTC30AQ86WT1 665 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TICAM1Q8IUC6 712 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 EGFL6Q8IUX8 553 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CROCCP3Q8IVE0 287 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 DEFB107AQ8IZN7 70 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 LRRC43Q8N309 656 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 PACRGLQ8N7B6 248 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 COLGALT1Q8NBJ5 622 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF526Q8TF50 670 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ARNTL2Q8WYA1 636 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 NT5C3BQ969T7 300 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 FAM84AQ96KN4 292 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TNIP3Q96KP6 325 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF560Q96MR9 790 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 PRICKLE1Q96MT3 831 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF778Q96MU6 729 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TWNKQ96RR1 684 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 EBF4Q9BQW3 602 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 EFHD1Q9BUP0 239 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TRIM62Q9BVG3 475 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 DRC3Q9H069 523 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 C12orf65Q9H3J6 166 aaKnown RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 EBF3Q9H4W6 596 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 C10orf88Q9H8K7 445 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CASS4Q9NQ75 786 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 SNX15Q9NRS6 342 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 OXSMQ9NWU1 459 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 MTMR10Q9NXD2 777 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 GDAP2Q9NXN4 497 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TUBA8Q9NY65 449 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 BTBD7Q9P203 1132 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 SUCOQ9UBS9 1254 aaKnown RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 PTBP2Q9UKA9 531 aaKnown RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 FZD10Q9ULW2 581 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 PHF24Q9UPV7 400 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 DYRK1BQ9Y463 629 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 AFG3L2Q9Y4W6 797 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 MYH9P35579 1960 aaKnown RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CCDC195A0A1B0GUA6 201 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PRSS51A0A1B0GVH4 220 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 WDR27A2RRH5 827 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SLC35F4A4IF30 521 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 C2orf71A6NGG8 1288 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 C9IYK1 514 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 RNF103O00237 685 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 TRIM38O00635 465 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 XPO1O14980 1071 aaKnown RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PAPSS1O43252 624 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 DDHD2O94830 711 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 STAMBPO95630 424 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 F11P03951 625 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 MYL3P08590 195 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 FAM58BPP0C7Q3 252 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SRGAP2BP0DMP2 458 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 KITP10721 976 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 EDN3P14138 238 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 HOXB8P17481 243 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 NCF2P19878 526 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CYP3A5P20815 502 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 ME2P23368 584 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PIK3R1P27986 724 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 AXLP30530 894 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CYP2C18P33260 490 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 TTKP33981 857 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 RAP1GAPP47736 663 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CSRP3P50461 194 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 RPL14P50914 215 aaKnown RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 ATP4BP51164 291 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CDH8P55286 799 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 GJA9P57773 515 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SLC25A3Q00325 362 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 STX5Q13190 355 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 MPP3Q13368 585 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 MSLNQ13421 630 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 FLOT2Q14254 428 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PRPSAP1Q14558 356 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SLC10A6Q3KNW5 377 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 GRAMD1BQ3KR37 738 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PABPC1LQ4VXU2 614 aaKnown RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SEZ6Q53EL9 994 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PIGGQ5H8A4 983 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CES4AQ5XG92 561 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 EEF1DP3Q658K8 133 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF772Q68DY9 489 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 NAPEPLDQ6IQ20 393 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 TRNP1Q6NT89 227 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 EFCAB12Q6NXP0 572 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PMF1Q6P1K2 205 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CASC4Q6P4E1 433 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 KIAA0408Q6ZU52 694 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 PIWIL4Q7Z3Z4 852 aaKnown RBP6.57□□□□□ -1.36
SNHG1-225ENST00000545920 LIMS2Q7Z4I7 341 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 GALNT7Q86SF2 657 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 SPATA24Q86W54 205 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 LRRC49Q8IUZ0 686 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 C10orf107Q8IVU9 208 aa6.57□□□□□ -1.36
SNHG1-225ENST00000545920 CNTN4Q8IWV2 1026 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms