RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TRIM31Q9BZY9 425 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 EPHX3Q9H6B9 360 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 PCDHGB4Q9UN71 923 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ADAMTS5Q9UNA0 930 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 OSGIN2Q9Y236 505 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ARHGAP35Q9NRY4 1499 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ARHGAP23Q9P227 1491 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ARHGAP31Q2M1Z3 1444 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 FYCO1Q9BQS8 1478 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 B4DLN1 442 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 TMEM232C9JQI7 657 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 PTGES3LE9PB15 166 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 CCER2I3L3R5 266 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 INO80B-WBP1J3KQ70 363 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 DSCR3O14972 297 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 FYB1O15117 783 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 PGM3O95394 542 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 ADRB2P07550 413 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 SPARCP09486 303 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 ALDOCP09972 364 aaKnown RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 HKR1P10072 659 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 COX7A2P14406 83 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 PKMP14618 531 aaKnown RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 ACSL1P33121 698 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 ABCD1P33897 745 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 BSGP35613 385 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 COPB1P53618 953 aaKnown RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 NLRP5P59047 1200 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 MC1RQ01726 317 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 IDI1Q13907 227 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 BECN1Q14457 450 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 IL13RA2Q14627 380 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 WTAPQ15007 396 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 TBC1D25Q3MII6 688 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 DUSP28Q4G0W2 176 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 FBXO43Q4G163 708 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 RILPL1Q5EBL4 403 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 ABHD17BQ5VST6 288 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 DENND2CQ68D51 928 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 FBXO42Q6P3S6 717 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 GJB7Q6PEY0 223 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 TMCO3Q6UWJ1 677 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 SZRD1Q7Z422 152 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 CNOT9Q92600 299 aaKnown RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 CAVIN3Q969G5 261 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 FAM120BQ96EK7 910 aaKnown RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 C5orf34Q96MH7 638 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 ASB2Q96Q27 587 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 MMS19Q96T76 1030 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 RNF26Q9BY78 433 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 SYNCQ9H7C4 482 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 TTC12Q9H892 705 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 SFXN1Q9H9B4 322 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 HSPB7Q9UBY9 170 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 ZNF215Q9UL58 517 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 CORO1CQ9ULV4 474 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 PKP3Q9Y446 797 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 INSL6Q9Y581 213 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 COL16A1Q07092 1604 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 AHDC1Q5TGY3 1603 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-222ENST00000545308 PIK3R4Q99570 1358 aa4.39□□□□□ -1.71
SNHG1-222ENST00000545308 ERVK-7P63135 1459 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 CCDC141Q6ZP82 1450 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 MBD5Q9P267 1494 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 LINC00473A8K010 186 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 VILLO15195 856 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 CNTN5O94779 1100 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 STARD3NLO95772 234 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 DNTTP04053 509 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 NPSP0C0P6 89 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 RFPL3SP0C7P2 107 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 PBX3P40426 434 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 ZNF84P51523 738 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 RARSP54136 660 aaKnown RBP4.38□□□□□ -1.71
SNHG1-222ENST00000545308 EFNB1P98172 346 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 DMWDQ09019 674 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 TMEM115Q12893 351 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-222ENST00000545308 FOXI1Q12951 378 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 SEMA3AQ14563 771 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 MED22Q15528 200 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 CNGA3Q16281 694 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 SLC18A3Q16572 532 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 ERCC6LQ2NKX8 1250 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 MFSD4BQ5TF39 518 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 KAZNQ674X7 775 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 C17orf99Q6UX52 265 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 MDGA2Q7Z553 956 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 KRT77Q7Z794 578 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 PEG10Q86TG7 708 aaKnown RBP4.38□□□□□ -1.71
SNHG1-222ENST00000545308 GLCCI1Q86VQ1 547 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 TMEM200AQ86VY9 491 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 RPAP2Q8IXW5 612 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-222ENST00000545308 WDTC1Q8N5D0 677 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 SETD9Q8NE22 299 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 FAM110DQ8TAY7 271 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-222ENST00000545308 NCSTNQ92542 709 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 KLHL15Q96M94 604 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 MACROD1Q9BQ69 325 aa4.38□□□□□ -1.71
SNHG1-222ENST00000545308 MXD3Q9BW11 206 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms