RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 ARHGAP20Q9P2F6 1191 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 ANGPTL2Q9UKU9 493 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 LUC7L2Q9Y383 392 aaKnown RBP17.25■□□□□ 0.35
HOXD8-204ENST00000544999 TP53BP1Q12888 1972 aaPredicted RBP17.24■□□□□ 0.35
HOXD8-204ENST00000544999 LAMA1P25391 3075 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 A0A1W2PR77 199 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 WNT1P04628 370 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 GYPCP04921 128 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 CD38P28907 300 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 DNA2P51530 1060 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 CCNHP51946 323 aaPredicted RBP17.24■□□□□ 0.35
HOXD8-204ENST00000544999 TAS2R38P59533 333 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 TPI1P60174 286 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 ZNF423Q2M1K9 1284 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 SLC45A4Q5BKX6 768 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 ERMARDQ5T6L9 678 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 NAPEPLDQ6IQ20 393 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 NEK5Q6P3R8 708 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 DBX2Q6ZNG2 339 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 ERN2Q76MJ5 926 aaKnown RBP17.24■□□□□ 0.35
HOXD8-204ENST00000544999 UMODL1-AS1Q8N2C9 162 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 ARFGAP1Q8N6T3 406 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 GRIN3AQ8TCU5 1115 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 SNRNP25Q9BV90 132 aaKnown RBP17.24■□□□□ 0.35
HOXD8-204ENST00000544999 TM6SF2Q9BZW4 377 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 TRIM7Q9C029 511 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 GPATCH2LQ9NWQ4 482 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 MYO1AQ9UBC5 1043 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 DMTF1Q9Y222 760 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.24■□□□□ 0.35
HOXD8-204ENST00000544999 NCOR2Q9Y618 2525 aa17.24■□□□□ 0.35
HOXD8-204ENST00000544999 SPAARA0A1B0GVQ0 90 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 RASA4BC9J798 803 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 RNF103O00237 685 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 RASA4O43374 803 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 DFNA5O60443 496 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 GSRP00390 522 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 MIPP30301 263 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 CCT8P50990 548 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 SNRPD1P62314 119 aaKnown RBP17.23■□□□□ 0.35
HOXD8-204ENST00000544999 SUZ12Q15022 739 aaKnown RBP17.23■□□□□ 0.35
HOXD8-204ENST00000544999 ACAP1Q15027 740 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 PARP15Q460N3 678 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 KCNT1Q5JUK3 1230 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 ZNF354CQ86Y25 554 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 PSTKQ8IV42 348 aaKnown RBP17.23■□□□□ 0.35
HOXD8-204ENST00000544999 CASKIN2Q8WXE0 1202 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 LRIG1Q96JA1 1093 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 CAMK1GQ96NX5 476 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 PEBP4Q96S96 227 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 XPO4Q9C0E2 1151 aaKnown RBP17.23■□□□□ 0.35
HOXD8-204ENST00000544999 DHX35Q9H5Z1 703 aaKnown RBP17.23■□□□□ 0.35
HOXD8-204ENST00000544999 PCSK1NQ9UHG2 260 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 PCDHB9Q9Y5E1 797 aa17.23■□□□□ 0.35
HOXD8-204ENST00000544999 H0Y8X5 98 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 EEF2KO00418 725 aaKnown RBP17.22■□□□□ 0.35
HOXD8-204ENST00000544999 WNT9AO14904 365 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 FLRT2O43155 660 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 BUB1O43683 1085 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 PRPSAP2O60256 369 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 RNGTTO60942 597 aaKnown RBP17.22■□□□□ 0.35
HOXD8-204ENST00000544999 LRCH4O75427 683 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 ITGB7P26010 798 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 MAT2AP31153 395 aaKnown RBP17.22■□□□□ 0.35
HOXD8-204ENST00000544999 PCK1P35558 622 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 NEK3P51956 506 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 ZNF135P52742 658 aaPredicted RBP17.22■□□□□ 0.35
HOXD8-204ENST00000544999 FAM193AP78312 1265 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 SIM1P81133 766 aaPredicted RBP17.22■□□□□ 0.35
HOXD8-204ENST00000544999 SERINC3Q13530 473 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 CA9Q16790 459 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 SETMARQ53H47 684 aaPredicted RBP17.22■□□□□ 0.35
HOXD8-204ENST00000544999 INO80DQ53TQ3 878 aaPredicted RBP17.22■□□□□ 0.35
HOXD8-204ENST00000544999 MFSD2AQ8NA29 543 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 OR2AP1Q8NGE2 309 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 HMCESQ96FZ2 354 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 TSPY26PQ9H489 355 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 ZDHHC6Q9H6R6 413 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 PCOLCE2Q9UKZ9 415 aa17.22■□□□□ 0.35
HOXD8-204ENST00000544999 DOCK9Q9BZ29 2069 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 PRAMEF26H0Y7S4 382 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 KCNK3O14649 394 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 CBFA2T2O43439 604 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 PCDHGA12O60330 932 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 CBFA2T3O75081 653 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 TMCC1O94876 653 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 ADRB3P13945 408 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 CASP14P31944 242 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 NDST2P52849 883 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 FOXC1Q12948 553 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 TRIP6Q15654 476 aaKnown RBP17.21■□□□□ 0.35
HOXD8-204ENST00000544999 LEKR1Q6ZMV7 388 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 CYP4V2Q6ZWL3 525 aaPredicted RBP17.21■□□□□ 0.35
HOXD8-204ENST00000544999 IQCHQ86VS3 1027 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 HORMAD1Q86X24 394 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 RYBPQ8N488 228 aaPredicted RBP17.21■□□□□ 0.35
HOXD8-204ENST00000544999 SETD7Q8WTS6 366 aaKnown RBP17.21■□□□□ 0.35
HOXD8-204ENST00000544999 CNTNAP3BQ96NU0 1288 aa17.21■□□□□ 0.35
HOXD8-204ENST00000544999 KCTD15Q96SI1 283 aaPredicted RBP17.21■□□□□ 0.35
HOXD8-204ENST00000544999 ELF4Q99607 663 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms