RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 ENTPD4Q9Y227 616 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ASTN1O14525 1302 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 SMIM35A0A1B0GVV1 85 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 KCNK1O00180 336 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 MAP3K6O95382 1288 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 FTH1P02794 183 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 ACAT1P24752 427 aaKnown RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 MATKP42679 507 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 SULT2A1Q06520 285 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 FAAP100Q0VG06 881 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 FUT2Q10981 343 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 NOMO2Q5JPE7 1267 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 VSTM1Q6UX27 236 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 PAGE2Q7Z2X7 111 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 PTCD2Q8WV60 388 aaKnown RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 NFKBIZQ9BYH8 718 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 CDHR5Q9HBB8 845 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 SLC24A3Q9HC58 644 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 RPS6KA6Q9UK32 745 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 NCF1BA6NI72 391 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 NCF1CA8MVU1 366 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 MAP2K7O14733 419 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 SEC22BO75396 215 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 NCF1P14598 390 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 TYMPP19971 482 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 GTF2E2P29084 291 aaKnown RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 TLX1P31314 330 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 ADCYAP1R1P41586 468 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 NOMO3P69849 1222 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 SETMARQ53H47 684 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 FAM46CQ5VWP2 391 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 RNF43Q68DV7 783 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 IRGCQ6NXR0 463 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 KCNK18Q7Z418 384 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 MON1AQ86VX9 555 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 CAMK1DQ8IU85 385 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 DHRSXQ8N5I4 330 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 SPATA20Q8TB22 786 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 MRPL57Q9BQC6 102 aaKnown RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 SH3BP4Q9P0V3 963 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 PNMA8BQ9ULN7 279 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 A0A087X0B3 334 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 URADA6NGE7 173 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 CLOCKO15516 846 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 MED26O95402 600 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 ADH1AP07327 375 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 COL6A2P12110 1019 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 BDNFP23560 247 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 CDH8P55286 799 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 RAB14P61106 215 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 SQLEQ14534 574 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 CRY1Q16526 586 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 PIGZQ86VD9 579 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 EXOC3L1Q86VI1 746 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 ZDHHC13Q8IUH4 622 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 TMEM199Q8N511 208 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 HGH1Q9BTY7 390 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 OSGEPL1Q9H4B0 414 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 LEF1Q9UJU2 399 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-207ENST00000544891 PCDHA11Q9Y5I1 949 aa9.12□□□□□ -0.95
NECAP1-207ENST00000544891 BTN3A1O00481 513 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 EPN2O95208 641 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ATP6V1B1P15313 513 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PAICSP22234 425 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 SLC16A1P53985 500 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 IRF8Q02556 426 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 TRAF2Q12933 501 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 BNIP2Q12982 314 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 RFX4Q33E94 735 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 USP41Q3LFD5 358 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 FBXL19Q6PCT2 694 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 TFAP2DQ7Z6R9 452 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 BAP1Q92560 729 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PROX1Q92786 737 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 TRAPPC9Q96Q05 1148 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 BBS4Q96RK4 519 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 EBNA1BP2Q99848 306 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 BAZ2AQ9UIF9 1905 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 F8VP50 259 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ATG7O95352 703 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 GSTM1P09488 218 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 NTSP30990 170 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 RPL22P35268 128 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 NOVP48745 357 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 CAPSQ13938 189 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 TSNQ15631 228 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 CES5AQ6NT32 575 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PTCD3Q96EY7 689 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ZBTB45Q96K62 511 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 SNED1Q8TER0 1413 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 SLC28A1O00337 649 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 FSBPO95073 299 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 SNHG28P0DPA3 235 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ITGA2P17301 1181 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 YBEYP58557 167 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 RPS7P62081 194 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms