RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 ZNF830Q96NB3 372 aaPredicted RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 FERMT1Q9BQL6 677 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 FUCA2Q9BTY2 467 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 HDAC8Q9BY41 377 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 TRIM5Q9C035 493 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 ISCUQ9H1K1 167 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CAPN10Q9HC96 672 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CD248Q9HCU0 757 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 GDF3Q9NR23 364 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 DNAAF2Q9NVR5 837 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 MPP6Q9NZW5 540 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 IFNKQ9P0W0 207 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 UVRAGQ9P2Y5 699 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 EIF2B4Q9UI10 523 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 VPS51Q9UID3 782 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 SLCO3A1Q9UIG8 710 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 INTS6Q9UL03 887 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 PPM1HQ9ULR3 514 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 FZD10Q9ULW2 581 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 AP4E1Q9UPM8 1137 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 APOBEC2Q9Y235 224 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 PCNX2A6NKB5 2137 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 KIAA1549LQ6ZVL6 1849 aa5.71□□□□□ -1.49
CLSTN3-215ENST00000544584 CELSR3Q9NYQ7 3312 aa5.71□□□□□ -1.49
CLSTN3-215ENST00000544584 PI4KAP42356 2102 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 SSU72P8A0A1W2PR75 194 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 NEMP2A6NFY4 417 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 TMEM191CA6NGB0 347 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 WASH4PA8MWX3 477 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 PRAMEF26H0Y7S4 382 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 VILLO15195 856 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 CCP110O43303 1012 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 TSPAN6O43657 245 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 PLRG1O43660 514 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 KDELR3O43731 214 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 NRDCO43847 1150 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 CNTN5O94779 1100 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 PCDH8O95206 1070 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ALPPL2P10696 532 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 CHRM1P11229 460 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 SRCP12931 536 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 MX2P20592 715 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ITGB7P26010 798 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ACSL1P33121 698 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 HSPA9P38646 679 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ARHGAP25P42331 645 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 CTSOP43234 321 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 GRK6P43250 576 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 TNNT3P45378 269 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 GALCP54803 685 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ADPRHP54922 357 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 HDAC4P56524 1084 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 RHOAP61586 193 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 PITX1P78337 314 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ELP6Q0PNE2 266 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 PTK2BQ14289 1009 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 KRT81Q14533 505 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 SPA17Q15506 151 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ALFQ53S48 1182 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 CCDC122Q5T0U0 273 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 SH3PXD2AQ5TCZ1 1133 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 NAPEPLDQ6IQ20 393 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ERAP2Q6P179 960 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 C22orf39Q6P5X5 142 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 NCEH1Q6PIU2 408 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 TMCO3Q6UWJ1 677 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 Q6ZVU0 165 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ERN2Q76MJ5 926 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 BZW1Q7L1Q6 419 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ZNF571Q7Z3V5 609 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 CACUL1Q86Y37 369 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 SLC41A1Q8IVJ1 513 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 RHOT2Q8IXI1 618 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 UMODL1-AS1Q8N2C9 162 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ZCCHC9Q8N567 271 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 DEFB119Q8N690 84 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ZNF366Q8N895 744 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 RTL3Q8N8U3 475 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 OR2AP1Q8NGE2 309 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 FRS2Q8WU20 508 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 TEKT4Q8WW24 435 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 BIRC7Q96CA5 298 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ERLEC1Q96DZ1 483 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 MRGPRX3Q96LB0 322 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ZNF599Q96NL3 588 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 NAP1L5Q96NT1 182 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 TUBGCP5Q96RT8 1024 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 PCDHB18PQ96TA0 734 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 FAM129BQ96TA1 746 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 MAK16Q9BXY0 300 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 NEUROG2Q9H2A3 272 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 HSD3B7Q9H2F3 369 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 DHX35Q9H5Z1 703 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 C6orf106Q9H6K1 298 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 GAREM1Q9H706 876 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ATP13A3Q9H7F0 1226 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ERVMER34-1Q9H9K5 563 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 NCKIPSDQ9NZQ3 722 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms