RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 UBA2Q9UBT2 640 aaPredicted RBP19.45■□□□□ 0.7
DDX55-211ENST00000544429 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 DFFAO00273 331 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 IL1BP01584 269 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 KRT1P04264 644 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 HOXD11P31277 338 aaPredicted RBP19.44■□□□□ 0.7
DDX55-211ENST00000544429 ACSL1P33121 698 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 PI4KAP42356 2102 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 CDKN2BP42772 138 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 PTGER3P43115 390 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 RPL6Q02878 288 aaKnown RBP19.44■□□□□ 0.7
DDX55-211ENST00000544429 RFTN1Q14699 578 aaPredicted RBP19.44■□□□□ 0.7
DDX55-211ENST00000544429 FAM46CQ5VWP2 391 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 PEAR1Q5VY43 1037 aaPredicted RBP19.44■□□□□ 0.7
DDX55-211ENST00000544429 ZNF354CQ86Y25 554 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 SLC41A1Q8IVJ1 513 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 TMEFF1Q8IYR6 380 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 KIAA1524Q8TCG1 905 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 KRT35Q92764 455 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 FATE1Q969F0 183 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 LRIG1Q96JA1 1093 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 HEPHQ9BQS7 1158 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 TM6SF2Q9BZW4 377 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 SGK2Q9HBY8 427 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 FBXL12Q9NXK8 326 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 IL36AQ9UHA7 158 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 FARP1Q9Y4F1 1045 aaPredicted RBP19.44■□□□□ 0.7
DDX55-211ENST00000544429 PCDHGA5Q9Y5G8 931 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 PCDHA3Q9Y5H8 950 aa19.44■□□□□ 0.7
DDX55-211ENST00000544429 PTPRZ1P23471 2315 aaPredicted RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 LAMA1P25391 3075 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 A0A1W2PP55 124 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 BCLAF3A2AJT9 711 aaKnown RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 LRP3O75074 770 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 PRNPP04156 253 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 CTNNA2P26232 953 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 RECQLP46063 649 aaPredicted RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 PEX5P50542 639 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 SNRPD1P62314 119 aaKnown RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 GBE1Q04446 702 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 SFSWAPQ12872 951 aaKnown RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 SLC10A2Q12908 348 aaPredicted RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 PLA2G2CQ5R387 149 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 MFSD7Q6UXD7 560 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 NT5DC3Q86UY8 548 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 RNF10Q8N5U6 811 aaKnown RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 RNF25Q96BH1 459 aaPredicted RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 TSGA13Q96PP4 275 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 PSKH2Q96QS6 385 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 NEUROG2Q9H2A3 272 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 DTLQ9NZJ0 730 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 HECAQ9UBI9 543 aaPredicted RBP19.43■□□□□ 0.7
DDX55-211ENST00000544429 ANKRD36A6QL64 1941 aa19.43■□□□□ 0.7
DDX55-211ENST00000544429 CFAP54Q96N23 3096 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 MACROD2A1Z1Q3 448 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 C1QTNF3-AMACRE9PGA6 284 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 SLC7A4O43246 635 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 MAP3K13O43283 966 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 BNIP3LO60238 219 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 LEFTY1O75610 366 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 POP4O95707 220 aaKnown RBP19.42■□□□□ 0.7
DDX55-211ENST00000544429 GARSP41250 739 aaKnown RBP19.42■□□□□ 0.7
DDX55-211ENST00000544429 CSNK1DP48730 415 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 IFI16Q16666 785 aaKnown RBP19.42■□□□□ 0.7
DDX55-211ENST00000544429 MYLK3Q32MK0 819 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 ARSIQ5FYB1 569 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 ATXN7L2Q5T6C5 722 aaPredicted RBP19.42■□□□□ 0.7
DDX55-211ENST00000544429 AGBL4Q5VU57 503 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 RCOR2Q8IZ40 523 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 HDDC3Q8N4P3 179 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 EXD1Q8NHP7 514 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 GDAP1L1Q96MZ0 367 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 GPR174Q9BXC1 333 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 TSGA10Q9BZW7 698 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 BTBD1Q9H0C5 482 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 SP110Q9HB58 689 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 CAPN6Q9Y6Q1 641 aa19.42■□□□□ 0.7
DDX55-211ENST00000544429 METTL12A8MUP2 240 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 MUSKO15146 869 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 PALMO75781 387 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 RNASEH2AO75792 299 aaKnown RBP19.41■□□□□ 0.7
DDX55-211ENST00000544429 SEMA4FO95754 770 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 RGRP47804 291 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 ADPRHP54922 357 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 RHOAP61586 193 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 ZNF33AQ06730 810 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 NSUN2Q08J23 767 aaKnown RBP eCLIP19.41■□□□□ 0.7
DDX55-211ENST00000544429 SLC10A7Q0GE19 358 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 CNTN1Q12860 1018 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 ZFYVE27Q5T4F4 411 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 PIP5KL1Q5T9C9 394 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 TMCO4Q5TGY1 634 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 SPOCD1Q6ZMY3 1216 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 FAM124AQ86V42 546 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 ALYREFQ86V81 257 aaKnown RBP19.41■□□□□ 0.7
DDX55-211ENST00000544429 DCLK2Q8N568 766 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 ATPAF2Q8N5M1 289 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 TEX26Q8N6G2 289 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 TSEN2Q8NCE0 465 aaKnown RBP19.41■□□□□ 0.7
DDX55-211ENST00000544429 GRIN3AQ8TCU5 1115 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms