RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 TPH1P17752 444 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 PTPN1P18031 435 aaKnown RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 GABRB3P28472 473 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 TKTL1P51854 596 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 ZNF135P52742 658 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 NAGLUP54802 743 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 DAOAP59103 153 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 NAPEPLDQ6IQ20 393 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 SLC41A1Q8IVJ1 513 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 FSTL5Q8N475 847 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 METTL25Q8N6Q8 603 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 TMEM102Q8N9M5 508 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 KDM1BQ8NB78 822 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 USP13Q92995 863 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 KLHL32Q96NJ5 620 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 GPR78Q96P69 363 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 OSMRQ99650 979 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 EPAS1Q99814 870 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 PKP2Q99959 881 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 ZCWPW1Q9H0M4 648 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 FAM49AQ9H0Q0 323 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 COPS7BQ9H9Q2 264 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 EFCAB1Q9HAE3 211 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 XPR1Q9UBH6 696 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 PPP1R1BQ9UD71 204 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 MAGED2Q9UNF1 606 aaPredicted RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 RUVBL2Q9Y230 463 aaKnown RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 GINS2Q9Y248 185 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 LZTS1Q9Y250 596 aa13.12□□□□□ -0.31
PTCD2-212ENST00000543322 COPG1Q9Y678 874 aaKnown RBP13.12□□□□□ -0.31
PTCD2-212ENST00000543322 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 GOLGA8TH3BQL2 631 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 TRIM38O00635 465 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 PSMD3O43242 534 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 CACNG3O60359 315 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 AXLP30530 894 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 GLRBP48167 497 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 LILRA4P59901 499 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 MAP7Q14244 749 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 SH2D4BQ5SQS7 431 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 TSTD2Q5T7W7 516 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 LINC00523Q86TU6 105 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 APBA2Q99767 749 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 UBE2OQ9C0C9 1292 aaKnown RBP13.11□□□□□ -0.31
PTCD2-212ENST00000543322 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.11□□□□□ -0.31
PTCD2-212ENST00000543322 CLIC5Q9NZA1 410 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 KLK14Q9P0G3 267 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 CNOT11Q9UKZ1 510 aaKnown RBP13.11□□□□□ -0.31
PTCD2-212ENST00000543322 PADI4Q9UM07 663 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 PCDHGB4Q9UN71 923 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 PCDHGB5Q9Y5G0 923 aa13.11□□□□□ -0.31
PTCD2-212ENST00000543322 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 YJEFN3A6XGL0 299 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 SDHDO14521 159 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 CFLARO15519 480 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 PENKP01210 267 aaPredicted RBP13.1□□□□□ -0.31
PTCD2-212ENST00000543322 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 SRGAP2BP0DMP2 458 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 AVPR1AP37288 418 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 PSMD8P48556 350 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 PGGT1BP53609 377 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 ART3Q13508 389 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 PRPSAP1Q14558 356 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 UGP2Q16851 508 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 NADK2Q4G0N4 442 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 PABPC1LQ4VXU2 614 aaKnown RBP13.1□□□□□ -0.31
PTCD2-212ENST00000543322 NXNQ6DKJ4 435 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 RBM44Q6ZP01 1051 aaKnown RBP13.1□□□□□ -0.31
PTCD2-212ENST00000543322 MFSD6LQ8IWD5 586 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 ANKRD13AQ8IZ07 590 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 PELI3Q8N2H9 469 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
PTCD2-212ENST00000543322 MARK4Q96L34 752 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 TSGA13Q96PP4 275 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 UTP6Q9NYH9 597 aaKnown RBP13.1□□□□□ -0.31
PTCD2-212ENST00000543322 ATXN10Q9UBB4 475 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 GNEQ9Y223 722 aaKnown RBP13.1□□□□□ -0.31
PTCD2-212ENST00000543322 TRPC5OSA6NMA1 111 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 STX16-NPEPL1H3BU86 382 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 GABRDO14764 452 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 AHSGP02765 367 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 ASLP04424 464 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 C8BP07358 591 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 FAM163BP0C2L3 166 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 BAG6P46379 1132 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 MAP3K7CLP57077 242 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 RAB10P61026 200 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 CDKL1Q00532 357 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 PPP2R5DQ14738 602 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 UBXN11Q5T124 520 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 KIAA0319Q5VV43 1072 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
PTCD2-212ENST00000543322 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 MPP4Q96JB8 637 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms