RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 KCTD14Q9BQ13 255 aaPredicted RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 GPR63Q9BZJ6 419 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 NXF3Q9H4D5 531 aaKnown RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 PNPLA8Q9NP80 782 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF358Q9NW07 568 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 TUBGCP4Q9UGJ1 667 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 PPM1HQ9ULR3 514 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 NRCAMQ92823 1304 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 FAM159BA6NKW6 160 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 ITM2AO43736 263 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 DAB1O75553 588 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 FKBP9O95302 570 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 CRTAMO95727 393 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 SERPINF2P08697 491 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 IQSEC1Q6DN90 963 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 FKBP9P1Q75LS8 142 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 TMEM86AQ8N2M4 240 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 PPP1R13LQ8WUF5 828 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 SKA1Q96BD8 255 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 C12orf42Q96LP6 360 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 SEPT5Q99719 369 aaPredicted RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 MRPS26Q9BYN8 205 aaKnown RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 TAS2R13Q9NYV9 303 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 DSEQ9UL01 958 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 DERAQ9Y315 318 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 RAD54BQ9Y620 910 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF839A8K0R7 811 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 ADM5C9JUS6 153 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 POMCP01189 267 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 HIST1H2AGP0C0S8 130 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 COL6A2P12110 1019 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 TSPAN8P19075 237 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 AOC1P19801 751 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 HIST1H2ADP20671 130 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 ADSLP30566 484 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 AQP4P55087 323 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 SQLEQ14534 574 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 GRM3Q14832 879 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 TAF1CQ15572 869 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 DLG2Q15700 870 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PFKFB4Q16877 469 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PPP1R15BQ5SWA1 713 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 CHADLQ6NUI6 762 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 CDHR3Q6ZTQ4 885 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 TMEM110Q86TL2 294 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 ADCK1Q86TW2 530 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PGAM4Q8N0Y7 254 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF483Q8TF39 744 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 LZICQ8WZA0 190 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 AZIN2Q96A70 460 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 HIST1H2AHQ96KK5 128 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 SIGLEC10Q96LC7 697 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 RNF145Q96MT1 663 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 HIST1H2AJQ99878 128 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 H2AFJQ9BTM1 129 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 OSBPL11Q9BXB4 747 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 C1orf21Q9H246 121 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 SIRPGQ9P1W8 387 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF229Q9UJW7 825 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 SMIM28A0A1B0GU29 152 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 EVPLLA8MZ36 301 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 MYO1GB0I1T2 1018 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 TK2O00142 265 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 RAMP2O60895 175 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 HOXB8P17481 243 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 LBPP18428 481 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 ATP6V1B2P21281 511 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PRDX6P30041 224 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PCYT1AP49585 367 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PPM1FP49593 454 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF132P52740 706 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 LSM12Q3MHD2 195 aaKnown RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 MFSD14CQ5VZR4 134 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 MAP1SQ66K74 1059 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 UGT3A1Q6NUS8 523 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 TREML1Q86YW5 311 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PTCD3Q96EY7 689 aaKnown RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 TUBGCP5Q96RT8 1024 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 CINPQ9BW66 212 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 COLEC11Q9BWP8 271 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 APOL5Q9BWW9 433 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 BCO2Q9BYV7 579 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PTPRHQ9HD43 1115 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 SCN3BQ9NY72 215 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 CNTN6Q9UQ52 1028 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 IQCA1LA6NCM1 817 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 NRP2O60462 931 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 AKT1P31749 480 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 HARS2P49590 506 aaKnown RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 CLCN5P51795 746 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 AIF1P55008 147 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 CDH13P55290 713 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 CLDN10P78369 228 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PCBP1Q15365 356 aaKnown RBP eCLIP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 NR6A1Q15406 480 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 NFE2Q16621 373 aaPredicted RBP8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 TRIM16LQ309B1 348 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 PKN3Q6P5Z2 889 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 STK32CQ86UX6 486 aa8.3□□□□□ -1.08
PRKAB1-207ENST00000542698 TTC30AQ86WT1 665 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms