RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 MYO1HQ8N1T3 1032 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 TSPAN14Q8NG11 270 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 RNF157Q96PX1 679 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 RTKNQ9BST9 563 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 B3GNT5Q9BYG0 378 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 KLC2Q9H0B6 622 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.28□□□□□ -0.92
THBS3-211ENST00000541990 Q9H521 79 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 CAAP1Q9H8G2 361 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 PFDN4Q9NQP4 134 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 FAIMQ9NVQ4 179 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 FAF1Q9UNN5 650 aaPredicted RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 SH3GLB1Q9Y371 365 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 Q9Y3F1 56 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 PCDHA11Q9Y5I1 949 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 TRPV2Q9Y5S1 764 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 PRSS51A0A1B0GVH4 220 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 ARHGAP10A1A4S6 786 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 ZNF189O75820 626 aaPredicted RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 ZNF26P17031 533 aaPredicted RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 SESN2P58004 480 aaPredicted RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 SFSWAPQ12872 951 aaKnown RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 MGAT5BQ3V5L5 792 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 HSP90AA5PQ58FG0 334 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 SMYD1Q8NB12 490 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 IRGQQ8WZA9 623 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 SLC29A1Q99808 456 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 SLC4A5Q9BY07 1137 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 CDH19Q9H159 772 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 UPF3AQ9H1J1 476 aaKnown RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 COQ10BQ9H8M1 238 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 CAB39LQ9H9S4 337 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 PLK2Q9NYY3 685 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 MOCS1Q9NZB8 636 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 EPS15L1Q9UBC2 864 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 GLRA3O75311 464 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 ENDOD1O94919 500 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 ERVK-10P10266 1014 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 TFE3P19532 575 aaPredicted RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 HARS2P49590 506 aaKnown RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 ATXN1P54253 815 aaKnown RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 SOWAHAQ2M3V2 549 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 FBXO47Q5MNV8 452 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 TIFABQ6ZNK6 161 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 BBS5Q8N3I7 341 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 LZTR1Q8N653 840 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 TRIML2Q8N7C3 387 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 SNX31Q8N9S9 440 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 SLC4A11Q8NBS3 891 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 ACVR1CQ8NER5 493 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 RXFP2Q8WXD0 754 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 LZICQ8WZA0 190 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 TMA16Q96EY4 203 aaKnown RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 RANBP9Q96S59 729 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 NPAS2Q99743 824 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 PCDHAC1Q9H158 963 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 STN1Q9H668 368 aaKnown RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 ARMC7Q9H6L4 198 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 GMPR2Q9P2T1 348 aaKnown RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 VCANP13611 3396 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 ARL5CA6NH57 179 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 STAMBPO95630 424 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 PSMC3P17980 439 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 GLDCP23378 1020 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 HOXC8P31273 242 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 CYP2C18P33260 490 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 NIPAL4Q0D2K0 466 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 STILQ15468 1287 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 PPP1R26Q5T8A7 1209 aaPredicted RBP9.27□□□□□ -0.93
THBS3-211ENST00000541990 C9orf57Q5W0N0 161 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 TAF2Q6P1X5 1199 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 BORAQ6PGQ7 559 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 BNC2Q6ZN30 1099 aaPredicted RBP9.27□□□□□ -0.93
THBS3-211ENST00000541990 Q6ZNX1 250 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 ZNF280BQ86YH2 543 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 GIPC3Q8TF64 312 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 CLEC4CQ8WTT0 213 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 LRTOMTQ8WZ04 291 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 CDC14AQ9UNH5 594 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 M0QYV0 167 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 HSPA4LO95757 839 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 CCL5P13501 91 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 ZNF23P17027 643 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 MGAT1P26572 445 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 ALDH3B2P48448 385 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 CD97P48960 835 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 PFKPQ01813 784 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 CD300CQ08708 224 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 IRF5Q13568 498 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 LSM12Q3MHD2 195 aaKnown RBP9.27□□□□□ -0.93
THBS3-211ENST00000541990 WSCD1Q658N2 575 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 PATL1Q86TB9 770 aaKnown RBP9.27□□□□□ -0.93
THBS3-211ENST00000541990 TDRD5Q8NAT2 981 aaKnown RBP9.27□□□□□ -0.93
THBS3-211ENST00000541990 KYQ8NBH2 561 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 ADCY4Q8NFM4 1077 aa9.27□□□□□ -0.93
THBS3-211ENST00000541990 DBF4BQ8NFT6 615 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms