RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 ZDHHC23Q8IYP9 409 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 GALNT15Q8N3T1 639 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 FSIP1Q8NA03 581 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 MYRIPQ8NFW9 859 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 TRIM63Q969Q1 353 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 RNFT2Q96EX2 444 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 LTV1Q96GA3 475 aaPredicted RBP3.53□□□□□ -1.84
CUL3-214ENST00000541548 THOC3Q96J01 351 aaKnown RBP3.53□□□□□ -1.84
CUL3-214ENST00000541548 TEFMQ96QE5 360 aaKnown RBP3.53□□□□□ -1.84
CUL3-214ENST00000541548 CADM1Q9BY67 442 aaKnown RBP3.53□□□□□ -1.84
CUL3-214ENST00000541548 CTDSP1Q9GZU7 261 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.53□□□□□ -1.84
CUL3-214ENST00000541548 SLCO5A1Q9H2Y9 848 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 SAYSD1Q9NPB0 183 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 RASSF1Q9NS23 344 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 LUZP4Q9P127 313 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 BAG5Q9UL15 447 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 FZD10Q9ULW2 581 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 DNAJC16Q9Y2G8 782 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 RAP2CQ9Y3L5 183 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 CLDN16Q9Y5I7 305 aa3.53□□□□□ -1.84
CUL3-214ENST00000541548 DOCK7Q96N67 2140 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 CCDC189A1A4V9 331 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 FAM90A7PA6NKC0 464 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 FAM90A22PA8MWA6 464 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 FAM90A12PA8MX19 464 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 FAM90A23PA8MXZ1 464 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 NPHP1O15259 732 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 RNMTO43148 476 aaKnown RBP3.52□□□□□ -1.85
CUL3-214ENST00000541548 DHX16O60231 1041 aaKnown RBP3.52□□□□□ -1.85
CUL3-214ENST00000541548 MLH1P40692 756 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 GRK6P43250 576 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 PCYT1AP49585 367 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 DSCR9P59020 149 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 KRTAP10-6P60371 365 aaPredicted RBP3.52□□□□□ -1.85
CUL3-214ENST00000541548 SLC18A2Q05940 514 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 BYSLQ13895 437 aaKnown RBP3.52□□□□□ -1.85
CUL3-214ENST00000541548 IL13RA2Q14627 380 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 ME3Q16798 604 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 DNTTIP2Q5QJE6 756 aaKnown RBP3.52□□□□□ -1.85
CUL3-214ENST00000541548 HEPHL1Q6MZM0 1159 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 ZNF354CQ86Y25 554 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 CAMK1DQ8IU85 385 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 DPP10Q8N608 796 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 RUBCNQ92622 972 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 HERPUD2Q9BSE4 406 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 SF3B5Q9BWJ5 86 aaKnown RBP3.52□□□□□ -1.85
CUL3-214ENST00000541548 IL25Q9H293 177 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 CATSPERBQ9H7T0 1116 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 ATP8A2Q9NTI2 1148 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 CDH22Q9UJ99 828 aa3.52□□□□□ -1.85
CUL3-214ENST00000541548 A0A1B0GUV1 79 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 TMEM247A6NEH6 219 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 MS4A18H0YCH9 400 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 CNPP09543 421 aaKnown RBP3.51□□□□□ -1.85
CUL3-214ENST00000541548 T-ENOLP0DO92 83 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 HOXD3P31249 432 aaPredicted RBP3.51□□□□□ -1.85
CUL3-214ENST00000541548 DPP6P42658 865 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 RBM5P52756 815 aaKnown RBP eCLIP3.51□□□□□ -1.85
CUL3-214ENST00000541548 ARHGAP8P85298 464 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 ILF3Q12906 894 aaKnown RBP eCLIP3.51□□□□□ -1.85
CUL3-214ENST00000541548 SETMARQ53H47 684 aaPredicted RBP3.51□□□□□ -1.85
CUL3-214ENST00000541548 CBWD5Q5RIA9 395 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 ARMC9Q7Z3E5 817 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 RBFAQ8N0V3 343 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 CPXCR1Q8N123 301 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 MEIS3Q99687 375 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 NTPCRQ9BSD7 190 aaKnown RBP3.51□□□□□ -1.85
CUL3-214ENST00000541548 PAGR1Q9BTK6 254 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 NPFFR1Q9GZQ6 430 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 LMAN2LQ9H0V9 348 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 MVB12BQ9H7P6 319 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 CHODLQ9H9P2 273 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 CLK4Q9HAZ1 481 aaKnown RBP3.51□□□□□ -1.85
CUL3-214ENST00000541548 WDR6Q9NNW5 1121 aaKnown RBP3.51□□□□□ -1.85
CUL3-214ENST00000541548 WNT16Q9UBV4 365 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 FBXO40Q9UH90 709 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 PROCRQ9UNN8 238 aa3.51□□□□□ -1.85
CUL3-214ENST00000541548 IGHV4-28A0A0C4DH34 117 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 C17orf102A2RUQ5 167 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 CBY3A6NI87 242 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 LIASO43766 372 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 TTKP33981 857 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 HNF1BP35680 557 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 CXCR3P49682 368 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 CDH12P55289 794 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 ACTR2P61160 394 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 BIRC3Q13489 604 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 PRKG1Q13976 671 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 CTTNQ14247 550 aaKnown RBP3.5□□□□□ -1.85
CUL3-214ENST00000541548 MYBPC2Q14324 1141 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 OTUD1Q5VV17 481 aaPredicted RBP3.5□□□□□ -1.85
CUL3-214ENST00000541548 C9orf57Q5W0N0 161 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 ATG9BQ674R7 924 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 DCP1BQ8IZD4 617 aaKnown RBP3.5□□□□□ -1.85
CUL3-214ENST00000541548 LMO3Q8TAP4 145 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 NUDCD2Q8WVJ2 157 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 GOLGA1Q92805 767 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 TMEM18Q96B42 140 aa3.5□□□□□ -1.85
CUL3-214ENST00000541548 TBC1D20Q96BZ9 403 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms