RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 HERVK_113Q902F9 699 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 GCC1Q96CN9 775 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 ZSCAN31Q96LW9 406 aaPredicted RBP4.22□□□□□ -1.73
KNTC1-211ENST00000541427 CAMK1GQ96NX5 476 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.22□□□□□ -1.73
KNTC1-211ENST00000541427 FAM234AQ9H0X4 552 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 FZD3Q9NPG1 666 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 RNF146Q9NTX7 359 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 SAGE1Q9NXZ1 904 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 PLEKHB1Q9UF11 243 aaPredicted RBP4.22□□□□□ -1.73
KNTC1-211ENST00000541427 ICKQ9UPZ9 632 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 LRP12Q9Y561 859 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 TTC3P53804 2025 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 CCDC141Q6ZP82 1450 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 UNC13BO14795 1591 aa4.22□□□□□ -1.73
KNTC1-211ENST00000541427 PLCH2O75038 1416 aa4.21□□□□□ -1.73
KNTC1-211ENST00000541427 PLEKHD1A6NEE1 506 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 H3BNX3 289 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 EIF3FO00303 357 aaPredicted RBP4.21□□□□□ -1.74
KNTC1-211ENST00000541427 HSD3B1P14060 373 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 CD72P21854 359 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 PRKCHP24723 683 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 PTPN9P43378 593 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 POLD2P49005 469 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 CCR5P51681 352 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 PPATQ06203 517 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 PTGR1Q14914 329 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 TBC1D9BQ66K14 1250 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 DENND1BQ6P3S1 775 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 TRAPPC11Q7Z392 1133 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 IGFN1Q86VF2 1251 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 ANKRD18AQ8IVF6 992 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 SMC5Q8IY18 1101 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 PELI3Q8N2H9 469 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 ANKRD44Q8N8A2 993 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 SETD9Q8NE22 299 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 MYRIPQ8NFW9 859 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 HDAC7Q8WUI4 952 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 FAR1Q8WVX9 515 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 TRIM63Q969Q1 353 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 WDR77Q9BQA1 342 aaPredicted RBP4.21□□□□□ -1.74
KNTC1-211ENST00000541427 IFT27Q9BW83 186 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 CXorf56Q9H5V9 222 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 STN1Q9H668 368 aaKnown RBP4.21□□□□□ -1.74
KNTC1-211ENST00000541427 TASP1Q9H6P5 420 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 NOD2Q9HC29 1040 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 TBC1D14Q9P2M4 693 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.21□□□□□ -1.74
KNTC1-211ENST00000541427 SQORQ9Y6N5 450 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 PZPP20742 1482 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 WDR7Q9Y4E6 1490 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 SYCP2Q9BX26 1530 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 ARHGEF12Q9NZN5 1544 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 MST1RQ04912 1400 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 C9orf84Q5VXU9 1444 aa4.21□□□□□ -1.74
KNTC1-211ENST00000541427 INO80Q9ULG1 1556 aaPredicted RBP4.2□□□□□ -1.74
KNTC1-211ENST00000541427 TEX14Q8IWB6 1497 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 TARSL2A2RTX5 802 aaKnown RBP4.2□□□□□ -1.74
KNTC1-211ENST00000541427 TMEM247A6NEH6 219 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 H0YGN5 161 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 KLK10O43240 276 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 TMCC1O94876 653 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 SYF2O95926 243 aaKnown RBP4.2□□□□□ -1.74
KNTC1-211ENST00000541427 UNGP13051 313 aaPredicted RBP4.2□□□□□ -1.74
KNTC1-211ENST00000541427 TNNT1P13805 278 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 HNF1BP35680 557 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 TMPRSS3P57727 454 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 SLC12A1Q13621 1099 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 ANKRD1Q15327 319 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 FBXO43Q4G163 708 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 MAP3K21Q5TCX8 1036 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 TMEM71Q6P5X7 295 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 GJB7Q6PEY0 223 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 PARM1Q6UWI2 310 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 CYP26C1Q6V0L0 522 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 BBS12Q6ZW61 710 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 LRRTM4Q86VH4 590 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 WDR5BQ86VZ2 330 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 FAM217AQ8IXS0 508 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 USP38Q8NB14 1042 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 ENGASEQ8NFI3 743 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 UBXN10Q96LJ8 280 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 CLSTN3Q9BQT9 956 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 REEP2Q9BRK0 252 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 B3GNT4Q9C0J1 378 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 RIC8AQ9NPQ8 531 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 NLKQ9UBE8 527 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 GDAQ9Y2T3 454 aa4.2□□□□□ -1.74
KNTC1-211ENST00000541427 ZNF644Q9H582 1327 aaPredicted RBP4.2□□□□□ -1.74
KNTC1-211ENST00000541427 RPRD2Q5VT52 1461 aaKnown RBP4.19□□□□□ -1.74
KNTC1-211ENST00000541427 ANKRD30AQ9BXX3 1397 aa4.19□□□□□ -1.74
KNTC1-211ENST00000541427 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.19□□□□□ -1.74
KNTC1-211ENST00000541427 DDTLA6NHG4 134 aaPredicted RBP4.19□□□□□ -1.74
KNTC1-211ENST00000541427 CD8B2A6NJW9 211 aa4.19□□□□□ -1.74
KNTC1-211ENST00000541427 FAM90A7PA6NKC0 464 aa4.19□□□□□ -1.74
KNTC1-211ENST00000541427 FAM90A22PA8MWA6 464 aa4.19□□□□□ -1.74
KNTC1-211ENST00000541427 FAM90A12PA8MX19 464 aa4.19□□□□□ -1.74
KNTC1-211ENST00000541427 FAM90A23PA8MXZ1 464 aa4.19□□□□□ -1.74
KNTC1-211ENST00000541427 CBX6O95503 412 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms