RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 TPH1P17752 444 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 PTPN3P26045 913 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 RPL9P32969 192 aaKnown RBP12.71□□□□□ -0.38
RNF4-222ENST00000541204 CCR10P46092 362 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 NUMBP49757 651 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 PGGT1BP53609 377 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 XIAPP98170 497 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 GRM2Q14416 872 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 PPP2R5DQ14738 602 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 PAFAH1B3Q15102 231 aaKnown RBP12.71□□□□□ -0.38
RNF4-222ENST00000541204 ARL13BQ3SXY8 428 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 SATL1Q86VE3 508 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 PSTKQ8IV42 348 aaKnown RBP12.71□□□□□ -0.38
RNF4-222ENST00000541204 SCN4BQ8IWT1 228 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 MFSD3Q96ES6 412 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 GORASP1Q9BQQ3 440 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 LRRC40Q9H9A6 602 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 VANGL2Q9ULK5 521 aa12.71□□□□□ -0.38
RNF4-222ENST00000541204 CASQ2O14958 399 aaPredicted RBP12.7□□□□□ -0.38
RNF4-222ENST00000541204 MOCS2O96007 188 aaPredicted RBP12.7□□□□□ -0.38
RNF4-222ENST00000541204 MPSTP25325 297 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 PRDX6P30041 224 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 MSX2P35548 267 aaPredicted RBP12.7□□□□□ -0.38
RNF4-222ENST00000541204 GRIK1P39086 918 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ALDH1A3P47895 512 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ZBTB17Q13105 803 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ANKRD20A4Q4UJ75 823 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
RNF4-222ENST00000541204 MAP3K21Q5TCX8 1036 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 CD300LGQ6UXG3 332 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ZNF280BQ86YH2 543 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 URGCPQ8TCY9 931 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ISL2Q96A47 359 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 IGSF9Q9P2J2 1179 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 DTNAQ9Y4J8 743 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 PTCH2Q9Y6C5 1203 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 BPTFQ12830 3046 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ZCWPW2A0A1B0GU75 182 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 GOLGA8TH3BQL2 631 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 DFFAO00273 331 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ATP9BO43861 1147 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 TRIM13O60858 407 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 PGM3O95394 542 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 C2P06681 752 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 GLDCP23378 1020 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 EPHA3P29320 983 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 CHN2P52757 468 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ITGA7Q13683 1181 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 CERCAMQ5T4B2 595 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 UGT2A3Q6UWM9 527 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 MRPL10Q7Z7H8 261 aaKnown RBP12.7□□□□□ -0.38
RNF4-222ENST00000541204 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 DQX1Q8TE96 717 aaKnown RBP12.7□□□□□ -0.38
RNF4-222ENST00000541204 RSPH1Q8WYR4 309 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 NCSTNQ92542 709 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 GATA5Q9BWX5 397 aaPredicted RBP12.7□□□□□ -0.38
RNF4-222ENST00000541204 TRPV6Q9H1D0 765 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 ADAM28Q9UKQ2 775 aa12.7□□□□□ -0.38
RNF4-222ENST00000541204 PRG3Q9Y2Y8 225 aaPredicted RBP12.7□□□□□ -0.38
RNF4-222ENST00000541204 OR6B1O95007 311 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 JCHAINP01591 159 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 PABPC4LP0CB38 370 aaKnown RBP12.69□□□□□ -0.38
RNF4-222ENST00000541204 PIM1P11309 404 aaPredicted RBP12.69□□□□□ -0.38
RNF4-222ENST00000541204 SAT1P21673 171 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 PIK3R1P27986 724 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 OGFRL1Q5TC84 451 aaPredicted RBP12.69□□□□□ -0.38
RNF4-222ENST00000541204 ARHGAP36Q6ZRI8 547 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 TMC7Q7Z402 723 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 CLEC14AQ86T13 490 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 TMEM135Q86UB9 458 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 ACBD6Q9BR61 282 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 SCN10AQ9Y5Y9 1956 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 C15orf38-AP3S2A0A0A6YYH1 394 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 TMEM88BA6NKF7 163 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 TMEM114B3SHH9 223 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 TK2O00142 265 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 DYNC1I2Q13409 638 aaKnown RBP12.69□□□□□ -0.38
RNF4-222ENST00000541204 TUSC3Q13454 348 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 TLR1Q15399 786 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 METTL21CQ5VZV1 264 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 KDELC2Q7Z4H8 507 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 ARPINQ7Z6K5 226 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 SDCCAG8Q86SQ7 713 aaPredicted RBP12.69□□□□□ -0.38
RNF4-222ENST00000541204 PQLC1Q8N2U9 271 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 GPR152Q8TDT2 470 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 DCUN1D1Q96GG9 259 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 EPAS1Q99814 870 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 ILKAPQ9H0C8 392 aaPredicted RBP12.69□□□□□ -0.38
RNF4-222ENST00000541204 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
RNF4-222ENST00000541204 CHRAC1Q9NRG0 131 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 ABI2Q9NYB9 513 aaPredicted RBP12.69□□□□□ -0.38
RNF4-222ENST00000541204 BFARQ9NZS9 450 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 STK39Q9UEW8 545 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 PEX1O43933 1283 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 AP2A1O95782 977 aa12.69□□□□□ -0.38
RNF4-222ENST00000541204 MPOP05164 745 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms