RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 T-ENOLP0DO92 83 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 CCKBRP32239 447 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 ANKRD1Q15327 319 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 RPE65Q16518 533 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 RUSC1-AS1Q66K80 236 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 TMC8Q8IU68 726 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 USP38Q8NB14 1042 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 TTC12Q9H892 705 aaPredicted RBP6.42□□□□□ -1.38
YBX3-210ENST00000540975 ZNF580Q9UK33 172 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 MYO6Q9UM54 1294 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 GPR52Q9Y2T5 361 aa6.42□□□□□ -1.38
YBX3-210ENST00000540975 VWA3AA6NCI4 1184 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 LDB2O43679 373 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 IL1AP01583 271 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 YWHAQP27348 245 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 PPFIA1Q13136 1202 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 FSCBQ5H9T9 825 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 FAM83HQ6ZRV2 1179 aaPredicted RBP6.41□□□□□ -1.38
YBX3-210ENST00000540975 BHLHA9Q7RTU4 235 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 RBFAQ8N0V3 343 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 ANKRD42Q8N9B4 389 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 OR4N2Q8NGD1 307 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 TMEM163Q8TC26 289 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 ADAMTS15Q8TE58 950 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 NEUROG1Q92886 237 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 APOLD1Q96LR9 279 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 GFM1Q96RP9 751 aaKnown RBP6.41□□□□□ -1.38
YBX3-210ENST00000540975 FZD10Q9ULW2 581 aa6.41□□□□□ -1.38
YBX3-210ENST00000540975 LACTBL1A8MY62 500 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 EYA2O00167 538 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 VWA5AO00534 786 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 SLC28A2O43868 658 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 HBP1O60381 514 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 CLDN7O95471 211 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 SERPINC1P01008 464 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 MMP3P08254 477 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 CD72P21854 359 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 PCYT1AP49585 367 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 LTBQ06643 244 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 SLC18A3Q16572 532 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 INO80DQ53TQ3 878 aaPredicted RBP6.4□□□□□ -1.38
YBX3-210ENST00000540975 KIAA1161Q6NSJ0 714 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 ATOH1Q92858 354 aaPredicted RBP6.4□□□□□ -1.38
YBX3-210ENST00000540975 TRIM63Q969Q1 353 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 SH3KBP1Q96B97 665 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 PYM1Q9BRP8 204 aaKnown RBP6.4□□□□□ -1.38
YBX3-210ENST00000540975 STN1Q9H668 368 aaKnown RBP6.4□□□□□ -1.38
YBX3-210ENST00000540975 GDAQ9Y2T3 454 aa6.4□□□□□ -1.38
YBX3-210ENST00000540975 TRIP12Q14669 1992 aaPredicted RBP6.39□□□□□ -1.39
YBX3-210ENST00000540975 GTPBP1O00178 669 aaKnown RBP6.39□□□□□ -1.39
YBX3-210ENST00000540975 KLK10O43240 276 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 THPOP40225 353 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 ZXDBP98169 803 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 CRYZQ08257 329 aaKnown RBP6.39□□□□□ -1.39
YBX3-210ENST00000540975 ZNF284Q2VY69 593 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 HSPH1Q92598 858 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 STAMQ92783 540 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 TWNKQ96RR1 684 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 CLSTN3Q9BQT9 956 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 LHPPQ9H008 270 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 IL36RNQ9UBH0 155 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 WNT16Q9UBV4 365 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 SUFUQ9UMX1 484 aa6.39□□□□□ -1.39
YBX3-210ENST00000540975 A0A096LPK6 155 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 CLEC18AA5D8T8 446 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 FAM90A7PA6NKC0 464 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 SH2D7A6NKC9 451 aaPredicted RBP6.38□□□□□ -1.39
YBX3-210ENST00000540975 FAM90A22PA8MWA6 464 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 FAM90A12PA8MX19 464 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 FAM90A23PA8MXZ1 464 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 ACAA1P09110 424 aaPredicted RBP6.38□□□□□ -1.39
YBX3-210ENST00000540975 WEE2P0C1S8 567 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 HOXB6P17509 224 aaKnown RBP6.38□□□□□ -1.39
YBX3-210ENST00000540975 TNFRSF8P28908 595 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 GPR12P47775 334 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 EGR4Q05215 589 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 DSC1Q08554 894 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 SLC12A1Q13621 1099 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 HNF4GQ14541 408 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 ME3Q16798 604 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 ATG9BQ674R7 924 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 NCAPH2Q6IBW4 605 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 MON1BQ7L1V2 547 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 PALB2Q86YC2 1186 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 GHDCQ8N2G8 530 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 CLEC18CQ8NCF0 446 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 RASSF8Q8NHQ8 419 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 ADAMTS14Q8WXS8 1223 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 TMEM18Q96B42 140 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 ZSCAN31Q96LW9 406 aaPredicted RBP6.38□□□□□ -1.39
YBX3-210ENST00000540975 REEP2Q9BRK0 252 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 KRTAP1-5Q9BYS1 174 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 CNPY2Q9Y2B0 182 aa6.38□□□□□ -1.39
YBX3-210ENST00000540975 PEX12O00623 359 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 SOX30O94993 753 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 GLUD1P00367 558 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 ADAP00813 363 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 PLA2G2AP14555 144 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 GLUD2P49448 558 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 CRELD2Q6UXH1 353 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms