RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SH2D3CQ8N5H7 860 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ATP11CQ8NB49 1132 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TSEN2Q8NCE0 465 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MYO19Q96H55 970 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PSKH2Q96QS6 385 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 HINFPQ9BQA5 517 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RHOXF2Q9BQY4 288 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CINPQ9BW66 212 aaPredicted RBP19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 PAK5Q9P286 719 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SEPT3Q9UH03 358 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 DMGDHQ9UI17 866 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 HCN2Q9UL51 889 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ATP8A1Q9Y2Q0 1164 aa19.23■□□□□ 0.67
TNFRSF1A-213ENST00000540022 METTL18O95568 372 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 NFKB1P19838 968 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ACTN2P35609 894 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 RGRP47804 291 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TMEM196Q5HYL7 178 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 FSTL4Q6MZW2 842 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ARHGEF18Q6ZSZ5 1173 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TPRG1Q6ZUI0 275 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 CASKIN2Q8WXE0 1202 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TRIM31Q9BZY9 425 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 KCNH6Q9H252 994 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ARHGEF3Q9NR81 526 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 LHX3Q9UBR4 397 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 WNT16Q9UBV4 365 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ASIC3Q9UHC3 531 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 FBXL21Q9UKT6 434 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TTLL3Q9Y4R7 772 aa19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 V9GYY5 206 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1A-213ENST00000540022 F5H423 210 aaPredicted RBP19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 K7EQS6 105 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 HEXIM1O94992 359 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SRPRAP08240 638 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 IVDP26440 423 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 AVPR2P30518 371 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 GPS1Q13098 491 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MLF2Q15773 248 aaPredicted RBP19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 EMC10Q5UCC4 262 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 NUDT18Q6ZVK8 323 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 SIX5Q8N196 739 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 BBS5Q8N3I7 341 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MSANTD3Q96H12 275 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MGME1Q9BQP7 344 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ERP44Q9BS26 406 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 EPC1Q9H2F5 836 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 GLOD4Q9HC38 313 aa19.21■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TTC24A2A3L6 582 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ATP9BO43861 1147 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ZNF821O75541 412 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GJB3O75712 270 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 EGFP01133 1207 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PSMB4P28070 264 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PLA2G5P39877 138 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 VASPP50552 380 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 RHOAP61586 193 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DLG2Q15700 870 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DGKKQ5KSL6 1271 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FAXCQ5TGI0 409 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DUPD1Q68J44 220 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 METTL3Q86U44 580 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 UCMAQ8WVF2 138 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FAM3CQ92520 227 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 EXOC2Q96KP1 924 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GBA3Q9H227 469 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 RSPH14Q9UHP6 348 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PLA2G4CQ9UP65 541 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 UTP11Q9Y3A2 253 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 STARD13Q9Y3M8 1113 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 KIAA1549LQ6ZVL6 1849 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 MIA3Q5JRA6 1907 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 BHMG1C9JSJ3 638 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ADCY8P40145 1251 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NNMTP40261 264 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TNFRSF4P43489 277 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TERF1P54274 439 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TUBB4BP68371 445 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ITKQ08881 620 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NIPAL4Q0D2K0 466 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ZNF234Q14588 700 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PARP6Q2NL67 630 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ACCSLQ4AC99 568 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 EGFLAMQ63HQ2 1017 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CWF19L1Q69YN2 538 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ALG1LQ6GMV1 187 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ITPRIPL1Q6GPH6 555 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CCDC70Q6NSX1 233 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 C22orf39Q6P5X5 142 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ARRDC2Q8TBH0 407 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CCHCR1Q8TD31 782 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FRS2Q8WU20 508 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 UBXN4Q92575 508 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 EXOC4Q96A65 974 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GORASP1Q9BQQ3 440 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TM6SF2Q9BZW4 377 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 POLR1EQ9GZS1 481 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 RAB17Q9H0T7 212 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms