RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 KDM1BQ8NB78 822 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 DTWD2Q8NBA8 298 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 TXNDC5Q8NBS9 432 aaKnown RBP6.62□□□□□ -1.35
SNHG1-212ENST00000539975 TSTD1Q8NFU3 115 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 TRIM58Q8NG06 486 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 ZNF670Q9BS34 389 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 CHRDQ9H2X0 955 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 FBRSL1Q9HCM7 1045 aaKnown RBP6.62□□□□□ -1.35
SNHG1-212ENST00000539975 RBM12Q9NTZ6 932 aaKnown RBP6.62□□□□□ -1.35
SNHG1-212ENST00000539975 TMEM248Q9NWD8 314 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 GPATCH2LQ9NWQ4 482 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 PPP2R2CQ9Y2T4 447 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 MTF2Q9Y483 593 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-212ENST00000539975 SNX10Q9Y5X0 201 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 PTPRDP23468 1912 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 DENND4AQ7Z401 1863 aa6.62□□□□□ -1.35
SNHG1-212ENST00000539975 MYH10P35580 1976 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 WASH4PA8MWX3 477 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 PRRT4C9JH25 899 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 FAM72CH0Y354 149 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 PI15O43692 258 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 MMP20O60882 483 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 PALMO75781 387 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CNTN5O94779 1100 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 HNRNPLP14866 589 aaKnown RBP eCLIP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 ERCC2P18074 760 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 KDELR1P24390 212 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 COL8A1P27658 744 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 IL1R2P27930 398 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 EIF1AXP47813 144 aaKnown RBP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 DNA2P51530 1060 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 PLK1P53350 603 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CCZ1BP86790 482 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CCZ1P86791 482 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 SLC25A11Q02978 314 aaKnown RBP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CSTF1Q05048 431 aaKnown RBP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 RAD51Q06609 339 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 MTAPQ13126 283 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 RPS6KA1Q15418 735 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 GEN1Q17RS7 908 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 RAB6CQ53S08 254 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 ANKRD20A8PQ5CZ79 823 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 FSCBQ5H9T9 825 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 TMCO4Q5TGY1 634 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 FAM72AQ5TYM5 149 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 DAB2IPQ5VWQ8 1189 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 FAM72DQ6L9T8 149 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 PSAPL1Q6NUJ1 521 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 XKR5Q6UX68 686 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 FAM72BQ86X60 149 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 VSIG1Q86XK7 387 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 RFX6Q8HWS3 928 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 UMODL1-AS1Q8N2C9 162 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 RYBPQ8N488 228 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 ARFGAP1Q8N6T3 406 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 DCAF4L2Q8NA75 395 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CCNYQ8ND76 341 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 OR13H1Q8NG92 308 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 USP33Q8TEY7 942 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CASKIN2Q8WXE0 1202 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 ATRIPQ8WXE1 791 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 TTC17Q96AE7 1141 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 PDLIM2Q96JY6 352 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CSPG4P5Q96PW8 444 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 LRFN3Q9BTN0 628 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 FAM126AQ9BYI3 521 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 LACRTQ9GZZ8 138 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 RAB6CQ9H0N0 254 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 KCNH6Q9H252 994 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 SUV39H2Q9H5I1 410 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 FBRSQ9HAH7 460 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 SP110Q9HB58 689 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 PCDH18Q9HCL0 1135 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 ANLNQ9NQW6 1124 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 DYRK4Q9NR20 520 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CACNA2D2Q9NY47 1150 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 CWC15Q9P013 229 aaKnown RBP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 THAP10Q9P2Z0 257 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-212ENST00000539975 FBXO4Q9UKT5 387 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 MMP17Q9ULZ9 603 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 TFR2Q9UP52 801 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 ERVW-1Q9UQF0 538 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 NCKAP1Q9Y2A7 1128 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 STON1Q9Y6Q2 735 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 DUSP10Q9Y6W6 482 aa6.61□□□□□ -1.35
SNHG1-212ENST00000539975 TCF20Q9UGU0 1960 aaKnown RBP6.6□□□□□ -1.35
SNHG1-212ENST00000539975 PATJQ8NI35 1801 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 EDDM13A0A1B0GTR0 161 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 CXorf51AA0A1B0GTR3 108 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 TCRBV21S2A2A0A5A6 115 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 TARSL2A2RTX5 802 aaKnown RBP6.6□□□□□ -1.35
SNHG1-212ENST00000539975 ZNF487B1APH4 448 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 RASA4BC9J798 803 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 APOL1O14791 398 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 TRIM24O15164 1050 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 RASA4O43374 803 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 KDELR3O43731 214 aa6.6□□□□□ -1.35
SNHG1-212ENST00000539975 ZNF189O75820 626 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms