RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 ADAMTS19Q8TE59 1207 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 USP33Q8TEY7 942 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 ARNTL2Q8WYA1 636 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 WBP2Q969T9 261 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 CFAP36Q96G28 342 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 OXNAD1Q96HP4 312 aaPredicted RBP9.83□□□□□ -0.84
MDH1-215ENST00000539945 SLC22A12Q96S37 553 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 TRPC7Q9HCX4 862 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.83□□□□□ -0.84
MDH1-215ENST00000539945 TTLL3Q9Y4R7 772 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 PCDHA11Q9Y5I1 949 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 MAD1L1Q9Y6D9 718 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 ZFP37Q9Y6Q3 630 aaPredicted RBP9.83□□□□□ -0.84
MDH1-215ENST00000539945 DENND4CQ5VZ89 1909 aa9.83□□□□□ -0.84
MDH1-215ENST00000539945 MTCL1Q9Y4B5 1905 aaKnown RBP9.83□□□□□ -0.84
MDH1-215ENST00000539945 A0A1B0GVM2 712 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ILVBLA1L0T0 632 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 MAGEB16A2A368 324 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 TCAF2A6NFQ2 919 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 J3KR12 359 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 GFRA2O00451 464 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 PRAMEF11O60813 436 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ALDH1A2O94788 518 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 FGF19O95750 216 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 HLA-DQB2P05538 268 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 PGAM1P18669 254 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 MGAT1P26572 445 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 HOXA9P31269 272 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 MSH2P43246 934 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 NPY2RP49146 381 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 EPHA5P54756 1037 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 GEMP55040 296 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SESN2P58004 480 aaPredicted RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 RPS24P62847 133 aaKnown RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 GNA12Q03113 381 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 CAMK1Q14012 370 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 EFTUD2Q15029 972 aaKnown RBP eCLIP9.82□□□□□ -0.845e-8■■■■■ 27.3
MDH1-215ENST00000539945 KBTBD12Q3ZCT8 623 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 C4orf48Q5BLP8 95 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 RNFT1Q5M7Z0 435 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 PPM1LQ5SGD2 360 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 NAPEPLDQ6IQ20 393 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 PDE12Q6L8Q7 609 aaKnown RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 OTOP3Q7RTS5 596 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SETD3Q86TU7 594 aaPredicted RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 TRABD2AQ86V40 505 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 FAM217AQ8IXS0 508 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ARL14EPQ8N8R7 260 aaPredicted RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 OR52K1Q8NGK4 314 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 MICAL1Q8TDZ2 1067 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 NSMCE1Q8WV22 266 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 DCAKDQ8WVC6 231 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 PRICKLE1Q96MT3 831 aaPredicted RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 ZNF599Q96NL3 588 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SAMD11Q96NU1 681 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 GCNAQ96QF7 691 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 PAFAH2Q99487 392 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 C1QTNF2Q9BXJ5 285 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SLC25A51Q9H1U9 297 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SP110Q9HB58 689 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ASAH2Q9NR71 780 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SMPD4Q9NXE4 827 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 MOCS1Q9NZB8 636 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 BFARQ9NZS9 450 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SENP1Q9P0U3 644 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 TBK1Q9UHD2 729 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 TBC1D30Q9Y2I9 924 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 CHD5Q8TDI0 1954 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 TRAV19A0A0A6YYK7 116 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 CDC14CA4D256 554 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 FAM159BA6NKW6 160 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SRRM3A6NNA2 597 aaPredicted RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 GRM6O15303 877 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 CCL16O15467 120 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 USP12O75317 370 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 NEBLO76041 1014 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 IRF1P10914 325 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 MYOGP15173 224 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ADRA1AP35348 466 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ZXDBP98169 803 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 CYP4F8P98187 520 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 GUCY1A3Q02108 690 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 SLC10A7Q0GE19 358 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 CDH17Q12864 832 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ZNF177Q13360 481 aaPredicted RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 MPP3Q13368 585 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 FRG1Q14331 258 aaKnown RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 TMED2Q15363 201 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 TMCO4Q5TGY1 634 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 CASC4Q6P4E1 433 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ZNF449Q6P9G9 518 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ZNF783Q6ZMS7 281 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 HTR3DQ70Z44 454 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 PRPF39Q86UA1 669 aaKnown RBP9.82□□□□□ -0.84
MDH1-215ENST00000539945 SLC26A11Q86WA9 606 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 LRRC6Q86X45 466 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 ZNF354CQ86Y25 554 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 MAB21L3Q8N8X9 362 aa9.82□□□□□ -0.84
MDH1-215ENST00000539945 DNAAF3Q8N9W5 541 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms