RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PLPP6Q8IY26 295 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 PCDH20Q8N6Y1 951 aaKnown RBP17.1■□□□□ 0.33
DDB1-215ENST00000539712 MFSD2AQ8NA29 543 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 ISG20Q96AZ6 181 aaKnown RBP17.1■□□□□ 0.33
DDB1-215ENST00000539712 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 ELF4Q99607 663 aaPredicted RBP17.1■□□□□ 0.33
DDB1-215ENST00000539712 KLC2Q9H0B6 622 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 MAGEH1Q9H213 219 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 HAUS4Q9H6D7 363 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 CBX8Q9HC52 389 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 IL36AQ9UHA7 158 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 DMTF1Q9Y222 760 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 CA5BQ9Y2D0 317 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 MSRB2Q9Y3D2 182 aa17.1■□□□□ 0.33
DDB1-215ENST00000539712 FARP1Q9Y4F1 1045 aaPredicted RBP17.1■□□□□ 0.33
DDB1-215ENST00000539712 SYCE3A1L190 88 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 TMCO5BA8MYB1 307 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.33
DDB1-215ENST00000539712 DFNA5O60443 496 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 RNGTTO60942 597 aaKnown RBP17.09■□□□□ 0.33
DDB1-215ENST00000539712 NUDT1P36639 197 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 CCNHP51946 323 aaPredicted RBP17.09■□□□□ 0.33
DDB1-215ENST00000539712 SUZ12Q15022 739 aaKnown RBP17.09■□□□□ 0.33
DDB1-215ENST00000539712 KLHL40Q2TBA0 621 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 NEK5Q6P3R8 708 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 SCYL2Q6P3W7 929 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 LEKR1Q6ZMV7 388 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 RTL3Q8N8U3 475 aaKnown RBP17.09■□□□□ 0.33
DDB1-215ENST00000539712 KDF1Q8NAX2 398 aaPredicted RBP17.09■□□□□ 0.33
DDB1-215ENST00000539712 TMEM145Q8NBT3 493 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 SAP25Q8TEE9 199 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 HEPHQ9BQS7 1158 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 TRIM7Q9C029 511 aa17.09■□□□□ 0.33
DDB1-215ENST00000539712 ZFR2Q9UPR6 939 aaKnown RBP17.09■□□□□ 0.33
DDB1-215ENST00000539712 ARID1BQ8NFD5 2236 aaPredicted RBP17.09■□□□□ 0.33
DDB1-215ENST00000539712 CELSR3Q9NYQ7 3312 aa17.08■□□□□ 0.33
DDB1-215ENST00000539712 ANKRD11Q6UB99 2663 aaPredicted RBP17.08■□□□□ 0.33
DDB1-215ENST00000539712 A0A1W2PQU0 124 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 TMEM191CA6NGB0 347 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 WASH4PA8MWX3 477 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 ATMINO43313 823 aaPredicted RBP17.08■□□□□ 0.32
DDB1-215ENST00000539712 KDELR3O43731 214 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 RAMP2O60895 175 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 CAPNS1P04632 268 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 GKP32189 559 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 ETFBP38117 255 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 PBX1P40424 430 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 GRK6P43250 576 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 POLD3Q15054 466 aaPredicted RBP17.08■□□□□ 0.32
DDB1-215ENST00000539712 ASIC2Q16515 512 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 FILIP1LQ4L180 1135 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 TMEM259Q4ZIN3 620 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 DCUN1D2Q6PH85 259 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 KANSL1Q7Z3B3 1105 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 TMC6Q7Z403 805 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 LUZP1Q86V48 1076 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 IQCHQ86VS3 1027 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 HORMAD1Q86X24 394 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 GATAD2AQ86YP4 633 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 KLK6Q92876 244 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 CDC6Q99741 560 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 EDEM3Q9BZQ6 932 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 TM6SF2Q9BZW4 377 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 ERVMER34-1Q9H9K5 563 aa17.08■□□□□ 0.32
DDB1-215ENST00000539712 HECAQ9UBI9 543 aaPredicted RBP17.08■□□□□ 0.32
DDB1-215ENST00000539712 PRAMEF26H0Y7S4 382 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 FTLP02792 175 aaPredicted RBP17.07■□□□□ 0.32
DDB1-215ENST00000539712 GZMAP12544 262 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 SKILP12757 684 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 PRLRP16471 622 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 ITGB7P26010 798 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 EPHB2P29323 1055 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 RECQLP46063 649 aaPredicted RBP17.07■□□□□ 0.32
DDB1-215ENST00000539712 RXRGP48443 463 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 DNA2P51530 1060 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 AIF1P55008 147 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 CA9Q16790 459 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 SETMARQ53H47 684 aaPredicted RBP17.07■□□□□ 0.32
DDB1-215ENST00000539712 FIGNQ5HY92 759 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 EFHC2Q5JST6 749 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 SEL1L3Q68CR1 1132 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 CYP4V2Q6ZWL3 525 aaPredicted RBP17.07■□□□□ 0.32
DDB1-215ENST00000539712 SKA1Q96BD8 255 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 PEBP4Q96S96 227 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 GDF3Q9NR23 364 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 PARVAQ9NVD7 372 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 NBEAQ8NFP9 2946 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 PLXNB3Q9ULL4 1909 aa17.07■□□□□ 0.32
DDB1-215ENST00000539712 PKD1L2Q7Z442 2459 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 ANKRD62A6NC57 917 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 SLC31A1O15431 190 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 SPINT1O43278 529 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 CREB3O43889 395 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 ADRB3P13945 408 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 OVGP1Q12889 678 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 BNIP3Q12983 259 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 FGL2Q14314 439 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 HGSNATQ68CP4 663 aa17.06■□□□□ 0.32
DDB1-215ENST00000539712 PARS2Q7L3T8 475 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms