RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RASGRP2Q7LDG7 609 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 SMIM29Q86T20 159 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 PGBD5Q8N414 524 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 ZNF114Q8NC26 417 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 SCAMP5Q8TAC9 235 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 SLC2A12Q8TD20 617 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 BICD1Q96G01 975 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 ABHD16BQ9H3Z7 469 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 KLQ9UEF7 1012 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 NOTCH3Q9UM47 2321 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 A0A0U1RQJ8 604 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 A0A1B0GVM2 712 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 MAGEA13PA6NCF6 341 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 NPIPB11E5RHQ5 1161 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 CLGNO14967 610 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 LMX1BO60663 402 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 PARNO95453 639 aaKnown RBP5.34□□□□□ -1.55
CCDC7-209ENST00000539197 CXCR3P49682 368 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 NEK3P51956 506 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 PNLIPRP1P54315 467 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 AK2P54819 239 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 STPG1Q5TH74 334 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 NCAPH2Q6IBW4 605 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 RBFAQ8N0V3 343 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 NAGSQ8N159 534 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 SCAIQ8N9R8 606 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 FAM71BQ8TC56 605 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 SGCZQ96LD1 299 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 TEFMQ96QE5 360 aaKnown RBP5.34□□□□□ -1.55
CCDC7-209ENST00000539197 PIGSQ96S52 555 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 RTKNQ9BST9 563 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 MSTO1Q9BUK6 570 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 CLK4Q9HAZ1 481 aaKnown RBP5.34□□□□□ -1.55
CCDC7-209ENST00000539197 NFS1Q9Y697 457 aa5.34□□□□□ -1.55
CCDC7-209ENST00000539197 LGALS16A8MUM7 142 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 TULP2O00295 520 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 TIMM23O14925 209 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 SYN3O14994 580 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 XPNPEP2O43895 674 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 CCNT1O60563 726 aaKnown RBP5.33□□□□□ -1.56
CCDC7-209ENST00000539197 AMD1P17707 334 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 PMS2CLQ68D20 193 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 ADAM5Q6NVV9 412 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 RHBDF2Q6PJF5 856 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 TMC8Q8IU68 726 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 ANKRD44Q8N8A2 993 aa5.33□□□□□ -1.56
CCDC7-209ENST00000539197 ELAC1Q9H777 363 aaKnown RBP5.33□□□□□ -1.56
CCDC7-209ENST00000539197 SKIV2L2P42285 1042 aaKnown RBP5.32□□□□□ -1.56
CCDC7-209ENST00000539197 CYP4A11Q02928 519 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 DLG1Q12959 904 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 DHX34Q14147 1143 aaKnown RBP5.32□□□□□ -1.56
CCDC7-209ENST00000539197 STARD3Q14849 445 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 SETMARQ53H47 684 aaPredicted RBP5.32□□□□□ -1.56
CCDC7-209ENST00000539197 XKR9Q5GH70 373 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 TTC22Q5TAA0 569 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 NFRKBQ6P4R8 1299 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 GALNT7Q86SF2 657 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 BRSK2Q8IWQ3 736 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 DEPTORQ8TB45 409 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 NEK9Q8TD19 979 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 ATOH1Q92858 354 aaPredicted RBP5.32□□□□□ -1.56
CCDC7-209ENST00000539197 C8orf48Q96LL4 319 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 CXorf56Q9H5V9 222 aa5.32□□□□□ -1.56
CCDC7-209ENST00000539197 J3KR12 359 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 HNRNPRO43390 633 aaKnown RBP5.31□□□□□ -1.56
CCDC7-209ENST00000539197 SERPINB2P05120 415 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 CHN1P15882 459 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 ADORA2A-AS1P86434 159 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 PDCLQ13371 301 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 HDAC1Q13547 482 aaPredicted RBP5.31□□□□□ -1.56
CCDC7-209ENST00000539197 DCTN1Q14203 1278 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 RPS6KA2Q15349 733 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 HIST2H2BCQ6DN03 193 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 RINLQ6ZS11 566 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 C9orf139Q6ZV77 190 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 SRLQ86TD4 932 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 SCMH1Q96GD3 660 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 UHRF2Q96PU4 802 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 MYD88Q99836 296 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 KATNAL1Q9BW62 490 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 BAG5Q9UL15 447 aa5.31□□□□□ -1.56
CCDC7-209ENST00000539197 ACTL6BO94805 426 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 PAK4O96013 591 aaPredicted RBP5.3□□□□□ -1.56
CCDC7-209ENST00000539197 CYP4B1P13584 511 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 ACP5P13686 325 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 ARSAP15289 507 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 YWHAQP27348 245 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 SSTR2P30874 369 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 DCTDP32321 178 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 PPM1AP35813 382 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 RPS6KA3P51812 740 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 PTK2BQ14289 1009 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 PLEKHO1Q53GL0 409 aaPredicted RBP5.3□□□□□ -1.56
CCDC7-209ENST00000539197 CCDC181Q5TID7 509 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 LIN54Q6MZP7 749 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 NEK10Q6ZWH5 1172 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 RRAGAQ7L523 313 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 RAB11FIP2Q7L804 512 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms