RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 KIR2DL1P43626 348 aaPredicted RBP17.53■□□□□ 0.4
CLN6-202ENST00000538696 STK19P49842 368 aaPredicted RBP17.53■□□□□ 0.4
CLN6-202ENST00000538696 SULT2A1Q06520 285 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 CALCOCO2Q13137 446 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 CASP8Q14790 479 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 UBXN2BQ14CS0 331 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 PDK1Q15118 436 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 EMC10Q5UCC4 262 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 EGFLAMQ63HQ2 1017 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 LINGO4Q6UY18 593 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 LEKR1Q6ZMV7 388 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 NUDT18Q6ZVK8 323 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 BZW1Q7L1Q6 419 aaKnown RBP17.53■□□□□ 0.4
CLN6-202ENST00000538696 TSEN2Q8NCE0 465 aaKnown RBP17.53■□□□□ 0.4
CLN6-202ENST00000538696 TFB1MQ8WVM0 346 aaKnown RBP17.53■□□□□ 0.4
CLN6-202ENST00000538696 ACDQ96AP0 544 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 LRRC45Q96CN5 670 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 MYO19Q96H55 970 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 LGMNQ99538 433 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 ZDHHC4Q9NPG8 344 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 ANAPC5Q9UJX4 755 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 MRPS17Q9Y2R5 130 aaKnown RBP17.53■□□□□ 0.4
CLN6-202ENST00000538696 PPP1R12AO14974 1030 aaPredicted RBP17.52■□□□□ 0.4
CLN6-202ENST00000538696 PEX11BO96011 259 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 DLDP09622 509 aaKnown RBP17.52■□□□□ 0.4
CLN6-202ENST00000538696 CHRNB1P11230 501 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 STIP1P31948 543 aaKnown RBP17.52■□□□□ 0.4
CLN6-202ENST00000538696 ECT2LQ008S8 904 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 IL10RBQ08334 325 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 PPIDQ08752 370 aaKnown RBP17.52■□□□□ 0.4
CLN6-202ENST00000538696 HIBCHQ6NVY1 386 aaPredicted RBP17.52■□□□□ 0.4
CLN6-202ENST00000538696 TRIM67Q6ZTA4 783 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 HDXQ7Z353 690 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 TAB3Q8N5C8 712 aaPredicted RBP17.52■□□□□ 0.4
CLN6-202ENST00000538696 BBOF1Q8ND07 529 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 UCMAQ8WVF2 138 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 RPL10LQ96L21 214 aaKnown RBP17.52■□□□□ 0.4
CLN6-202ENST00000538696 TSGA13Q96PP4 275 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 FAM129AQ9BZQ8 928 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 THAP10Q9P2Z0 257 aaPredicted RBP17.52■□□□□ 0.4
CLN6-202ENST00000538696 SLC25A13Q9UJS0 675 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 HPCAL4Q9UM19 191 aa17.52■□□□□ 0.4
CLN6-202ENST00000538696 MAP2K7O14733 419 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 NCAM2O15394 837 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 TIMM44O43615 452 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 RNF40O75150 1001 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 MT-CO1P00395 513 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 PDGFBP01127 241 aaPredicted RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 ATP5BP06576 529 aaKnown RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 SRPRAP08240 638 aaKnown RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 HSPA9P38646 679 aaKnown RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 SERPINH1P50454 418 aaKnown RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 FZD5Q13467 585 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 ZNF234Q14588 700 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 FBXO43Q4G163 708 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 RNASEH2BQ5TBB1 312 aaKnown RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 CWF19L1Q69YN2 538 aaKnown RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 RETSATQ6NUM9 610 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 LRRC49Q8IUZ0 686 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 CCDC13Q8IYE1 715 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 MREGQ8N565 214 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 CCNYQ8ND76 341 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 CCDC110Q8TBZ0 833 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 ACOX2Q99424 681 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 TXLNGYQ9BZA5 131 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 UBA2Q9UBT2 640 aaPredicted RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 MTRF1LQ9UGC7 380 aaKnown RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 TPX2Q9ULW0 747 aaKnown RBP17.51■□□□□ 0.39
CLN6-202ENST00000538696 HS3ST2Q9Y278 367 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 TTC28Q96AY4 2481 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 ANKRD36A6QL64 1941 aa17.51■□□□□ 0.39
CLN6-202ENST00000538696 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.5■□□□□ 0.39
CLN6-202ENST00000538696 CXorf51AA0A1B0GTR3 108 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 FAM170BA6NMN3 283 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 K7ERQ8 282 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 SLC34A2O95436 690 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 SRCP12931 536 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 ALADP13716 330 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 HNRNPLP14866 589 aaKnown RBP eCLIP17.5■□□□□ 0.39
CLN6-202ENST00000538696 CCNCP24863 283 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 TIE1P35590 1138 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 IL12RB1P42701 662 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 VASPP50552 380 aaPredicted RBP17.5■□□□□ 0.39
CLN6-202ENST00000538696 CAV1Q03135 178 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 AP1B1Q10567 949 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 LRRC32Q14392 662 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 FNDC3BQ53EP0 1204 aaKnown RBP17.5■□□□□ 0.39
CLN6-202ENST00000538696 DGKKQ5KSL6 1271 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 HEATR6Q6AI08 1181 aaKnown RBP17.5■□□□□ 0.39
CLN6-202ENST00000538696 TIGD7Q6NT04 549 aaPredicted RBP17.5■□□□□ 0.39
CLN6-202ENST00000538696 Q6ZS52 159 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 TMC3Q7Z5M5 1100 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 SH2D3CQ8N5H7 860 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 ZNF513Q8N8E2 541 aaPredicted RBP17.5■□□□□ 0.39
CLN6-202ENST00000538696 PJA1Q8NG27 643 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 USP33Q8TEY7 942 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 HTR3CQ8WXA8 447 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 MAML1Q92585 1016 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 PWWP2AQ96N64 755 aa17.5■□□□□ 0.39
CLN6-202ENST00000538696 BRD8Q9H0E9 1235 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms