RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SCG3Q8WXD2 468 aaKnown RBP25.26■■□□□ 1.63
RAB40C-204ENST00000538492 UROC1Q96N76 676 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 NSMCE4AQ9NXX6 385 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 F8W8V4 182 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 ZMPSTE24O75844 475 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 SBK3P0C264 359 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 ARNTP27540 789 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 GPR15P49685 360 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 CNGA3Q16281 694 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 PCSK7Q16549 785 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 TRMT5Q32P41 509 aaKnown RBP25.25■■□□□ 1.63
RAB40C-204ENST00000538492 TMEM151AQ8N4L1 468 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 TSNARE1Q96NA8 513 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 CYP4F11Q9HBI6 524 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 BATF3Q9NR55 127 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 TMEM114B3SHH9 223 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 MPSTP25325 297 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 DNAJB2P25686 324 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 ACTR3P61158 418 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 DDR2Q16832 855 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 NOMO2Q5JPE7 1267 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 MFSD6LQ8IWD5 586 aa25.25■■□□□ 1.63
RAB40C-204ENST00000538492 GOLGA8QA0A0J9YX86 632 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 GOLGA8OA6NCC3 632 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 GOLGA8NF8WBI6 632 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 ZBTB14O43829 449 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 DDHD2O94830 711 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 LUC7L3O95232 432 aaKnown RBP25.24■■□□□ 1.63
RAB40C-204ENST00000538492 PDHA1P08559 390 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 MYL4P12829 197 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 GCKP35557 465 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 GRIA4P48058 902 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 CSRP3P50461 194 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 GEMP55040 296 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 SEPT6Q14141 434 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 CEP97Q8IW35 865 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 OR52B2Q96RD2 323 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 TRPV6Q9H1D0 765 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 ADRA1AP35348 466 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 HADHAP40939 763 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 ARCN1P48444 511 aaKnown RBP25.24■■□□□ 1.63
RAB40C-204ENST00000538492 TFAP2DQ7Z6R9 452 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 ZNF598Q86UK7 904 aaKnown RBP25.24■■□□□ 1.63
RAB40C-204ENST00000538492 CENPLQ8N0S6 344 aaPredicted RBP25.24■■□□□ 1.63
RAB40C-204ENST00000538492 RTL3Q8N8U3 475 aaKnown RBP25.24■■□□□ 1.63
RAB40C-204ENST00000538492 MRGPRX2Q96LB1 330 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 ZIC5Q96T25 663 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 TCAF1Q9Y4C2 921 aa25.24■■□□□ 1.63
RAB40C-204ENST00000538492 KCNU1A8MYU2 1149 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 RPLP2P05387 115 aaKnown RBP25.23■■□□□ 1.63
RAB40C-204ENST00000538492 TYMPP19971 482 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 FCGRTP55899 365 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 PRKCZQ05513 592 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 SLC12A1Q13621 1099 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 ZYG11AQ6WRX3 759 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 FSTL5Q8N475 847 aaPredicted RBP25.23■■□□□ 1.63
RAB40C-204ENST00000538492 ANKRD6Q9Y2G4 727 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 NEMP1O14524 444 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 SORBS2O94875 1100 aaKnown RBP25.23■■□□□ 1.63
RAB40C-204ENST00000538492 ACADSP16219 412 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 GRK4P32298 578 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 SLC1A2P43004 574 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 EPHB1P54762 984 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 NAGLUP54802 743 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 PIK3R6Q5UE93 754 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 SPNS2Q8IVW8 549 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 MIEF2Q96C03 454 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 ILKAPQ9H0C8 392 aaPredicted RBP25.23■■□□□ 1.63
RAB40C-204ENST00000538492 WDR55Q9H6Y2 383 aaPredicted RBP25.23■■□□□ 1.63
RAB40C-204ENST00000538492 IPO11Q9UI26 975 aaKnown RBP25.23■■□□□ 1.63
RAB40C-204ENST00000538492 PCDHB8Q9UN66 801 aa25.23■■□□□ 1.63
RAB40C-204ENST00000538492 FAM95CA0A1B0GW59 222 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 SLC10A3P09131 477 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 INHBEP58166 350 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 LIPMQ5VYY2 423 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 GPR152Q8TDT2 470 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 CMTM5Q96DZ9 223 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 ENTPD7Q9NQZ7 604 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 ACOT9Q9Y305 439 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 APOA4P06727 396 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 UGP2Q16851 508 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 ZNF470Q6ECI4 717 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 ANO7Q6IWH7 933 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 TIGD7Q6NT04 549 aaPredicted RBP25.22■■□□□ 1.63
RAB40C-204ENST00000538492 POTEHQ6S545 545 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 FRMD7Q6ZUT3 714 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 CNTN4Q8IWV2 1026 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 ZNF212Q9UDV6 495 aa25.22■■□□□ 1.63
RAB40C-204ENST00000538492 PRG3Q9Y2Y8 225 aaPredicted RBP25.22■■□□□ 1.63
RAB40C-204ENST00000538492 H2AFYO75367 372 aaKnown RBP25.21■■□□□ 1.63
RAB40C-204ENST00000538492 PDE5AO76074 875 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 MLLT6P55198 1093 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-204ENST00000538492 BLMHQ13867 455 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 ARL13AQ5H913 290 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-204ENST00000538492 MICAL1Q8TDZ2 1067 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 SERPINB11Q96P15 392 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 TTC1Q99614 292 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 NOL6Q9H6R4 1146 aaKnown RBP25.21■■□□□ 1.63
RAB40C-204ENST00000538492 TCF7L2Q9NQB0 619 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 XPR1Q9UBH6 696 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms