RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 CIB2O75838 187 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 GSRP00390 522 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 IGLV3-27P01718 113 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 AMHP03971 560 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 INHAP05111 366 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 HLA-DQB2P05538 268 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 C2P06681 752 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 OR4Q2P0C623 313 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 HAPLN1P10915 354 aaPredicted RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 STMN1P16949 149 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 HLA-DPA1P20036 260 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 KCNA4P22459 653 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 NMBRP28336 390 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 PRDX6P30041 224 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 CD151P48509 253 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 SERPINH1P50454 418 aaKnown RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 CSRP3P50461 194 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 SLC12A2P55011 1212 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 WNT3AP56704 352 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 RAB10P61026 200 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 POU4F1Q01851 419 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 EFEMP1Q12805 493 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 USP10Q14694 798 aaKnown RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 MBTPS1Q14703 1052 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 MS4A13Q5J8X5 152 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 RABGAP1LQ5R372 815 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 PIK3R6Q5UE93 754 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 FAM171A1Q5VUB5 890 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 LIPMQ5VYY2 423 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 METTL21CQ5VZV1 264 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 FUT10Q6P4F1 479 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 KDELC1Q6UW63 502 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 CES3Q6UWW8 571 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 RANBP10Q6VN20 620 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 ZYG11AQ6WRX3 759 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 OTOP3Q7RTS5 596 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 CMC1Q7Z7K0 106 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 SETD3Q86TU7 594 aaPredicted RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 RTN4RL1Q86UN2 441 aaPredicted RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 ZC3HC1Q86WB0 502 aaKnown RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 C10orf107Q8IVU9 208 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 AFAP1L2Q8N4X5 818 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 TEX26Q8N6G2 289 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 ENDOVQ8N8Q3 282 aaKnown RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 NETO2Q8NC67 525 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 C2CD4AQ8NCU7 369 aaPredicted RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 FAM13CQ8NE31 585 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 OR6Y1Q8NGX8 325 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 CD99L2Q8TCZ2 262 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 AGAP11Q8TF27 550 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 PDCD6IPQ8WUM4 868 aaKnown RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 STMN2Q93045 179 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 CMTM5Q96DZ9 223 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 IMP4Q96G21 291 aaKnown RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 RSRC1Q96IZ7 334 aaKnown RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 CAPNS2Q96L46 248 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 TTLL2Q9BWV7 592 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 ACE2Q9BYF1 805 aaPredicted RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 NMUR2Q9GZQ4 415 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 POLR1EQ9GZS1 481 aaKnown RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 TASP1Q9H6P5 420 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 DCLRE1BQ9H816 532 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 RNPEPL1Q9HAU8 725 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 CD248Q9HCU0 757 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 ATP13A1Q9HD20 1204 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 FBXO6Q9NRD1 293 aaPredicted RBP6.72□□□□□ -1.33
USP28-206ENST00000538224 CHRAC1Q9NRG0 131 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 ARL8BQ9NVJ2 186 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 TMEM216Q9P0N5 145 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 MARCH2Q9P0N8 246 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 SLC17A6Q9P2U8 582 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 HSFX1Q9UBD0 423 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 VTI1BQ9UEU0 232 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 SLC39A10Q9ULF5 831 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 ACOT9Q9Y305 439 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 LTBP2Q14767 1821 aa6.71□□□□□ -1.33
USP28-206ENST00000538224 FAM95CA0A1B0GW59 222 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 DRGXA6NNA5 263 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 F5H5T6 163 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 F8W810 466 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 F8W8V4 182 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 GSC2O15499 205 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 SLC7A4O43246 635 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 B4GALT3O60512 393 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 PMPCBO75439 489 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 LUC7L3O95232 432 aaKnown RBP6.71□□□□□ -1.34
USP28-206ENST00000538224 VAPBO95292 243 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 MT-CYBP00156 380 aaPredicted RBP6.71□□□□□ -1.34
USP28-206ENST00000538224 EPOP01588 193 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 FGF1P05230 155 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 ZDHHC11BP0C7U3 371 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 KITP10721 976 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 CES1P23141 567 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 ADSLP30566 484 aaPredicted RBP6.71□□□□□ -1.34
USP28-206ENST00000538224 ETFBP38117 255 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 PBX3P40426 434 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 SLC26A3P40879 764 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 SLC11A2P49281 568 aa6.71□□□□□ -1.34
USP28-206ENST00000538224 TUFMP49411 452 aaKnown RBP6.71□□□□□ -1.34
USP28-206ENST00000538224 CCNG1P51959 295 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms