RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ALDH7A1P49419 539 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 SLC26A2P50443 739 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 TUBA1BP68363 451 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 CCNA1P78396 465 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 ZNF846Q147U1 533 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 NFE2Q16621 373 aaPredicted RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 BRDTQ58F21 947 aaPredicted RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 Q5BKY6 102 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 PAGE2BQ5JRK9 111 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 PXDC1Q5TGL8 231 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 NEK5Q6P3R8 708 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 DRICH1Q6PGQ1 229 aaPredicted RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 CYP20A1Q6UW02 462 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 EPGNQ6UW88 154 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 SLC16A12Q6ZSM3 486 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 TUBA1AQ71U36 451 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 GATAD2AQ86YP4 633 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 LEMD2Q8NC56 503 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 LPGAT1Q92604 370 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 C2orf49Q9BVC5 232 aaPredicted RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 RMND5AQ9H871 391 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 PIH1D1Q9NWS0 290 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 PSME2Q9UL46 239 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 DRG1Q9Y295 367 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 SPEF1Q9Y4P9 236 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 A6NJY4 79 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 SNPHO15079 494 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 NSFP46459 744 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 CDK8P49336 464 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 PLA2G16P53816 162 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 CTAG1AP78358 180 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 MERTKQ12866 999 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 ERAP2Q6P179 960 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 C16orf89Q6UX73 402 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 ARCQ7LC44 396 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 DCP2Q8IU60 420 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 CANT1Q8WVQ1 401 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 NELL1Q92832 810 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 DMRTB1Q96MA1 342 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 SLC4A9Q96Q91 983 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 VPS35Q96QK1 796 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 CD209Q9NNX6 404 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 C12orf4Q9NQ89 552 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 TMEM216Q9P0N5 145 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 IPO11Q9UI26 975 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 ENPP5Q9UJA9 477 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 PRORSD1PA6NEY8 169 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 H0Y858 1186 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 TPP1O14773 563 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 PLIN3O60664 434 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 CST8O60676 142 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 GAS7O60861 476 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 EIF2S1P05198 315 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 EEF1B2P24534 225 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 MPSTP25325 297 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 IL1R2P27930 398 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 FMO4P31512 558 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 ABCE1P61221 599 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 ATP6V0D1P61421 351 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 YBX1P67809 324 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 DPYSL3Q14195 570 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 GEN1Q17RS7 908 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 RSBN1Q5VWQ0 802 aaPredicted RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 GTF2IRD2BQ6EKJ0 949 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 ZCCHC8Q6NZY4 707 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 GK5Q6ZS86 529 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 FRA10AC1Q70Z53 315 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 GTF2IRD2Q86UP8 949 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 ZNF354CQ86Y25 554 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 LRRC49Q8IUZ0 686 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 DAW1Q8N136 415 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 OR2T34Q8NGX1 318 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 RSAD2Q8WXG1 361 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 TXNDC15Q96J42 360 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 DGCR6LQ9BY27 220 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 IMPG2Q9BZV3 1241 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 CLPBQ9H078 707 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 POPDC2Q9HBU9 364 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 GIMAP4Q9NUV9 329 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 RBAKQ9NYW8 714 aaPredicted RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 IFT80Q9P2H3 777 aaPredicted RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 PRKAB1Q9Y478 270 aa10.83□□□□□ -0.68
RTN3-208ENST00000537981 ZFC3H1O60293 1989 aaKnown RBP10.83□□□□□ -0.68
RTN3-208ENST00000537981 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 FOCADQ5VW36 1801 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 CCDC163A0A0D9SF12 145 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 RGSL1A5PLK6 1076 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 TBKBP1A7MCY6 615 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 KCNU1A8MYU2 1149 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 F5H423 210 aaPredicted RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 AGRPO00253 132 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 AP3D1O14617 1153 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 LZTS3O60299 673 aaPredicted RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 ATP5BP06576 529 aaKnown RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 HTR1BP28222 390 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 SOX11P35716 441 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 HADHAP40939 763 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 NAMPTP43490 491 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 MFAP3P55082 362 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms