RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 STAP1Q9ULZ2 295 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 COPG1Q9Y678 874 aaKnown RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 TCAF2A6NFQ2 919 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 TARM1B6A8C7 271 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 H3BRB1 525 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 TK2O00142 265 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 XPO1O14980 1071 aaKnown RBP12.32□□□□□ -0.44
CPSF7-218ENST00000537641 PSMD3O43242 534 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 SNAI1O95863 264 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-218ENST00000537641 AMHP03971 560 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 SBK3P0C264 359 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 IMPDH2P12268 514 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 HOXD8P13378 290 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-218ENST00000537641 CD1EP15812 388 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 ADORA2BP29275 332 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 NOS2P35228 1153 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 KPNA2P52292 529 aaKnown RBP12.32□□□□□ -0.44
CPSF7-218ENST00000537641 GTF2A2P52657 109 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 EMP3P54852 163 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 PSME3P61289 254 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 GK3PQ14409 553 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 GRM3Q14832 879 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 SMAD1Q15797 465 aaKnown RBP12.32□□□□□ -0.44
CPSF7-218ENST00000537641 UGP2Q16851 508 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 OLFML2BQ68BL8 750 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 NXNQ6DKJ4 435 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 DHRS4L2Q6PKH6 230 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 CARM1Q86X55 608 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 LSMEM2Q8N112 164 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 GALNT4Q8N4A0 578 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 BEST2Q8NFU1 509 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 TSPAN14Q8NG11 270 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 HM13Q8TCT9 377 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 EME1Q96AY2 570 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 FAR2Q96K12 515 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 SCYL1Q96KG9 808 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 BIRC8Q96P09 236 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 PPP1R16BQ96T49 567 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 NPY6RQ99463 290 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 CCT7Q99832 543 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 SYT17Q9BSW7 474 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 TUT1Q9H6E5 874 aaKnown RBP12.32□□□□□ -0.44
CPSF7-218ENST00000537641 IARS2Q9NSE4 1012 aaKnown RBP12.32□□□□□ -0.44
CPSF7-218ENST00000537641 SLC39A10Q9ULF5 831 aa12.32□□□□□ -0.44
CPSF7-218ENST00000537641 G3BP2Q9UN86 482 aaKnown RBP12.32□□□□□ -0.44
CPSF7-218ENST00000537641 ARHGEF37A1IGU5 675 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 C9IYK1 514 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 H3BNH8 94 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 PFDN1O60925 122 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 H6PDO95479 791 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 ADARP55265 1226 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 RHDQ02161 417 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 PPIDQ08752 370 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 STX5Q13190 355 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 IKBKEQ14164 716 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 TRIM25Q14258 630 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 SQLEQ14534 574 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 GRIK4Q16099 956 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 ANKRD23Q86SG2 305 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 AMIGO2Q86SJ2 522 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 ZC3HC1Q86WB0 502 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 PELI3Q8N2H9 469 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 LRRC43Q8N309 656 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 AFAP1L2Q8N4X5 818 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 C7orf31Q8N865 590 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 CEP70Q8NHQ1 597 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 NT5C3BQ969T7 300 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 NTAN1Q96AB6 310 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 TMA16Q96EY4 203 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 MS4A4AQ96JQ5 239 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 SNX27Q96L92 541 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 SLC9A7Q96T83 725 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 VAT1Q99536 393 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 UNC93B1Q9H1C4 597 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 DPEP3Q9H4B8 488 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 DDX18Q9NVP1 670 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 IPO11Q9UI26 975 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 MYRFQ9Y2G1 1151 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 RNF11Q9Y3C5 154 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 AP4S1Q9Y587 144 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 CCL15-CCL14A0A0B4J2E2 113 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 TCRBV3S1A0A5B6 114 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 HEATR9A2RTY3 570 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 IQCA1LA6NCM1 817 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 FAM155AB1AL88 458 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 SDHDO14521 159 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 PPEF2O14830 753 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 TRIM24O15164 1050 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 TRPA1O75762 1119 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 BMP10O95393 424 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 MMP3P08254 477 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 NAGLUP54802 743 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 DNAJB13P59910 316 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 LPIN1Q14693 890 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 USP10Q14694 798 aaKnown RBP12.31□□□□□ -0.44
CPSF7-218ENST00000537641 PSMD5Q16401 504 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 CCL15Q16663 113 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 DUSP28Q4G0W2 176 aa12.31□□□□□ -0.44
CPSF7-218ENST00000537641 GLRA4Q5JXX5 417 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms