RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SLC6A4P31645 630 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 ATP5C1P36542 298 aaKnown RBP17.71■□□□□ 0.43
SNX17-210ENST00000537606 RENBPP51606 427 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 DEFB103AP81534 67 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 MPP3Q13368 585 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 HNRNPDQ14103 355 aaKnown RBP17.71■□□□□ 0.43
SNX17-210ENST00000537606 SEPT6Q14141 434 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 PCID2Q5JVF3 399 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 ICE2Q659A1 982 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 PKN3Q6P5Z2 889 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 KLHDC8BQ8IXV7 354 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 TMEM216Q9P0N5 145 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 SIRPGQ9P1W8 387 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 ACTL7AQ9Y615 435 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 DRGXA6NNA5 263 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 SCAMP3O14828 347 aaKnown RBP17.71■□□□□ 0.43
SNX17-210ENST00000537606 BPGMP07738 259 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 SPRP35270 261 aaPredicted RBP17.71■□□□□ 0.43
SNX17-210ENST00000537606 SKIV2L2P42285 1042 aaKnown RBP17.71■□□□□ 0.43
SNX17-210ENST00000537606 CTC1Q2NKJ3 1217 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 HSF5Q4G112 596 aaPredicted RBP17.71■□□□□ 0.43
SNX17-210ENST00000537606 PLD6Q8N2A8 252 aaKnown RBP17.71■□□□□ 0.43
SNX17-210ENST00000537606 TBX21Q9UL17 535 aa17.71■□□□□ 0.43
SNX17-210ENST00000537606 TANC1Q9C0D5 1861 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 A0A0D9SEW6 157 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 ZNF840PA6NDX5 716 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 CHUKO15111 745 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 GSRP00390 522 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 TUFMP49411 452 aaKnown RBP17.7■□□□□ 0.42
SNX17-210ENST00000537606 LIMK2P53671 638 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 CTBP1Q13363 440 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 CNGA3Q16281 694 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 CNKSR3Q6P9H4 555 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 RANBP10Q6VN20 620 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 LRRC49Q8IUZ0 686 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 DENND1CQ8IV53 801 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 ARID3BQ8IVW6 561 aaPredicted RBP17.7■□□□□ 0.42
SNX17-210ENST00000537606 DENND6AQ8IWF6 608 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 PGBD5Q8N414 524 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 PNPLA1Q8N8W4 532 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 TTLL2Q9BWV7 592 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 DNMT3LQ9UJW3 386 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 COCHO43405 550 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 HMGA1P17096 107 aaKnown RBP17.7■□□□□ 0.42
SNX17-210ENST00000537606 IRF9Q00978 393 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 RING1Q06587 406 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 KIAA0100Q14667 2235 aaKnown RBP17.7■□□□□ 0.42
SNX17-210ENST00000537606 FASTKD1Q53R41 847 aaKnown RBP17.7■□□□□ 0.42
SNX17-210ENST00000537606 ALYREFQ86V81 257 aaKnown RBP17.7■□□□□ 0.42
SNX17-210ENST00000537606 RNF168Q8IYW5 571 aaPredicted RBP17.7■□□□□ 0.42
SNX17-210ENST00000537606 OR52K2Q8NGK3 314 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 ZNF398Q8TD17 642 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 TOX2Q96NM4 488 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 SLC25A51Q9H1U9 297 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 ENTPD7Q9NQZ7 604 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 L3MBTL1Q9Y468 752 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
SNX17-210ENST00000537606 VGLL3A8MV65 326 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 F5H5T6 163 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 KLF11O14901 512 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 GLRA3O75311 464 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 PRKCGP05129 697 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 IRF1P10914 325 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 RPS24P62847 133 aaKnown RBP17.69■□□□□ 0.42
SNX17-210ENST00000537606 ZBTB16Q05516 673 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 PLD1Q13393 1074 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 KDELC1Q6UW63 502 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 TNS4Q8IZW8 715 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 ZNF461Q8TAF7 563 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 ACMSDQ8TDX5 336 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 TOP1MTQ969P6 601 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 IMP4Q96G21 291 aaKnown RBP17.69■□□□□ 0.42
SNX17-210ENST00000537606 RNF38Q9H0F5 515 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 LRMDAQ9H2I8 198 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 ARL8BQ9NVJ2 186 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 ARMCX1Q9P291 453 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 DCDC2Q9UHG0 476 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 AP3B1O00203 1094 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 PLIN3O60664 434 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 LYPLA1O75608 230 aaPredicted RBP17.69■□□□□ 0.42
SNX17-210ENST00000537606 TGDSO95455 350 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 GABRB3P28472 473 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 OCRLQ01968 901 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 TAF12Q16514 161 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 SPNS2Q8IVW8 549 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 TTC16Q8NEE8 873 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 PPHLN1Q8NEY8 458 aaKnown RBP17.69■□□□□ 0.42
SNX17-210ENST00000537606 TMEM169Q96HH4 297 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 VPS39Q96JC1 886 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 OXCT2Q9BYC2 517 aaPredicted RBP17.69■□□□□ 0.42
SNX17-210ENST00000537606 COMMD8Q9NX08 183 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 AFF4Q9UHB7 1163 aaKnown RBP17.69■□□□□ 0.42
SNX17-210ENST00000537606 SLC39A10Q9ULF5 831 aa17.69■□□□□ 0.42
SNX17-210ENST00000537606 ZFP37Q9Y6Q3 630 aaPredicted RBP17.69■□□□□ 0.42
SNX17-210ENST00000537606 C2orf78A6NCI8 922 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 ACSL4O60488 711 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 PARNO95453 639 aaKnown RBP17.68■□□□□ 0.42
SNX17-210ENST00000537606 KLKB1P03952 638 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 SOD2P04179 222 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 MMP2P08253 660 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms