RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 OLFM2O95897 454 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ERCC2P18074 760 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TPSB2P20231 275 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HOXA9P31269 272 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SLC6A4P31645 630 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 NR2C2P49116 596 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 NUMBP49757 651 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HYAL1Q12794 435 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PRKD1Q15139 912 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TPSAB1Q15661 275 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RFWD3Q6PCD5 774 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 KLHDC10Q6PID8 442 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CYS1Q717R9 158 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 BZW1Q7L1Q6 419 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DENND1CQ8IV53 801 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TAB3Q8N5C8 712 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RIN3Q8TB24 985 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 MRPS31Q92665 395 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CDK5RAP1Q96SZ6 601 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 EPAS1Q99814 870 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 KLF16Q9BXK1 252 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TTYH1Q9H313 450 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PLAC1Q9HBJ0 212 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CCL26Q9Y258 94 aa13.19□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DCLK1O15075 740 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DIAPH2O60879 1101 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DNAJC6O75061 913 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SNRPAP09012 282 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CEBPBP17676 345 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HDCP19113 662 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CCNFP41002 786 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CCNG1P51959 295 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 EPHA5P54756 1037 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RING1Q06587 406 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PABPC1LQ4VXU2 614 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PDZD4Q76G19 769 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 LRRC6Q86X45 466 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ZNF683Q8IZ20 524 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 BTN2A3PQ96KV6 586 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SLC46A2Q9BY10 475 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PRKD2Q9BZL6 878 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 OSBPL2Q9H1P3 480 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DTLQ9NZJ0 730 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RCOR3Q9P2K3 495 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HBS1LQ9Y450 684 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 GOLGA8RI6L899 631 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 XYLBO75191 536 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PIAS1O75925 651 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HNRNPA1P09651 372 aaKnown RBP eCLIP13.18□□□□□ -0.38e-6■□□□□ 10.1
CDK5RAP3-202ENST00000536708 PTPN2P17706 415 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CDC25CP30307 473 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PPP3CCP48454 512 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SGSHP51688 502 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PRSS36Q5K4E3 855 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 GPR158Q5T848 1215 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TFAP2DQ7Z6R9 452 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PRPF39Q86UA1 669 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SMG7Q92540 1137 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 IGSF8Q969P0 613 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 MTBPQ96DY7 904 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CELF6Q96J87 481 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 GCNAQ96QF7 691 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TSSK1BQ9BXA7 367 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TRIM55Q9BYV6 548 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ZDHHC7Q9NXF8 308 aa13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ZC3H7BQ9UGR2 993 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DENND4AQ7Z401 1863 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SOX1O00570 391 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 AVILO75366 819 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 KRT37O76014 449 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CNTN5O94779 1100 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SLC2A3P11169 496 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PYGBP11216 843 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PTPN4P29074 926 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SATB1Q01826 763 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CBX2Q14781 532 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ALFQ53S48 1182 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 FAM91A1Q658Y4 838 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 FBXL22Q6P050 247 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CLNKQ7Z7G1 428 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ATP6V0D2Q8N8Y2 350 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ST13P5Q8NFI4 369 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ITFG1Q8TB96 612 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PTPRN2Q92932 1015 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SIGLEC10Q96LC7 697 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 KLF6Q99612 283 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SLC24A3Q9HC58 644 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 NPHS2Q9NP85 383 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms