RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ETFDHQ16134 617 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 MAPKAPK3Q16644 382 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 MPEG1Q2M385 716 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 CCSAPQ6IQ19 270 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 CCDC129Q6ZRS4 1044 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 TEX11Q8IYF3 940 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 OSR1Q8TAX0 266 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 ZNF566Q969W8 418 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 C18orf8Q96DM3 657 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 CINPQ9BW66 212 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 CERS4Q9HA82 394 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 SEMA5BQ9P283 1151 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 PI4KBQ9UBF8 816 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 TBX21Q9UL17 535 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 VPS4AQ9UN37 437 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 PA2G4Q9UQ80 394 aaKnown RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 ZNFX1Q9P2E3 1918 aaKnown RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 MYO5AQ9Y4I1 1855 aaKnown RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 ZNF318Q5VUA4 2279 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 FLT1P17948 1338 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 C16orf96A6NNT2 1141 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 PODXLO00592 558 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 TIMP1P01033 207 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 GH2P01242 217 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 DGKQP52824 942 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 TIMM10P62072 90 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 CCNA1P78396 465 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 BFSP2Q13515 415 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 KPNB1Q14974 876 aaKnown RBP6.06□□□□□ -1.44
CLIP1-207ENST00000536634 TMEM31Q5JXX7 168 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 TMEM63BQ5T3F8 832 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 CCDC181Q5TID7 509 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 ZNF425Q6IV72 752 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 ANKRD33Q7Z3H0 272 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 SRLQ86TD4 932 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 SLC44A5Q8NCS7 719 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 ACER1Q8TDN7 264 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 GRAMD1AQ96CP6 724 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 HIC2Q96JB3 615 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 SGCZQ96LD1 299 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 C12orf42Q96LP6 360 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 MOV10L1Q9BXT6 1211 aaKnown RBP6.06□□□□□ -1.44
CLIP1-207ENST00000536634 ADGRE3Q9BY15 652 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 EIF2AQ9BY44 585 aaKnown RBP6.06□□□□□ -1.44
CLIP1-207ENST00000536634 HMG20BQ9P0W2 317 aa6.06□□□□□ -1.44
CLIP1-207ENST00000536634 ZFHX2Q9C0A1 2572 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-207ENST00000536634 FNDC1Q4ZHG4 1894 aaPredicted RBP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 COL11A1P12107 1806 aaPredicted RBP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 PARP14Q460N5 1801 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 E5RJQ4 531 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 DSCR3O14972 297 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 DHHO43323 396 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 RNF8O76064 485 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 CIAO1O76071 339 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 TOP3BO95985 862 aaKnown RBP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 MYOGP15173 224 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 CSF2RAP15509 400 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 JAK3P52333 1124 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 WDR5P61964 334 aaKnown RBP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 YPEL5P62699 121 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 Q4G0T1 1027 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 FBXO38Q6PIJ6 1188 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 PIK3AP1Q6ZUJ8 805 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 ADGRA1Q86SQ6 560 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 KRT73Q86Y46 540 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 CLASRPQ8N2M8 674 aaKnown RBP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 SMG7Q92540 1137 aaKnown RBP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 RPL36ALQ969Q0 106 aaKnown RBP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 FAM118BQ9BPY3 351 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 RPAP3Q9H6T3 665 aaPredicted RBP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 AATFQ9NY61 560 aaKnown RBP eCLIP6.05□□□□□ -1.44
CLIP1-207ENST00000536634 MYH1P12882 1939 aa6.05□□□□□ -1.44
CLIP1-207ENST00000536634 CACNA1HO95180 2353 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 DMXL1Q9Y485 3027 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 A0A1B0GUL7 405 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 EPOPA6NHQ4 379 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 M0QZQ0 153 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 ADAM10O14672 748 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 RRHO14718 337 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 VIPP01282 170 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 SRGAP2BP0DMP2 458 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 ABCB4P21439 1286 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 IL15P40933 162 aaPredicted RBP6.04□□□□□ -1.44
CLIP1-207ENST00000536634 NSUN2Q08J23 767 aaKnown RBP eCLIP6.04□□□□□ -1.44
CLIP1-207ENST00000536634 PPIGQ13427 754 aaKnown RBP eCLIP6.04□□□□□ -1.44
CLIP1-207ENST00000536634 GAB1Q13480 694 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 KIAA1755Q5JYT7 1200 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 C11orf87Q6NUJ2 197 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 DEPTORQ8TB45 409 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 IGFBPL1Q8WX77 278 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 SPRTNQ9H040 489 aaPredicted RBP6.04□□□□□ -1.44
CLIP1-207ENST00000536634 SPATC1LQ9H0A9 340 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 FSCN3Q9NQT6 498 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 ABHD10Q9NUJ1 306 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 RAI14Q9P0K7 980 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 CEP83Q9Y592 693 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 FRYLO94915 3013 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 ROBO3Q96MS0 1386 aa6.04□□□□□ -1.44
CLIP1-207ENST00000536634 SYNRGQ9UMZ2 1314 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms