RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PTAR1Q7Z6K3 402 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 RASAL3Q86YV0 1011 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 SLC15A4Q8N697 577 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 USP13Q92995 863 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 CMTM5Q96DZ9 223 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 HERC2P3Q9BVR0 1158 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 SNX25Q9H3E2 840 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 PALMDQ9NP74 551 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 UBQLN1Q9UMX0 589 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 CCDC162PA2VCL2 907 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 PAPSS1O43252 624 aaPredicted RBP14.19□□□□□ -0.14
LIG1-203ENST00000536218 GMNNO75496 209 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 KRT75O95678 551 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 APOEP02649 317 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 TRAF2Q12933 501 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 CCDC14Q49A88 953 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 DCLRE1AQ6PJP8 1040 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 Q8N9G6 341 aaPredicted RBP14.19□□□□□ -0.14
LIG1-203ENST00000536218 SLC35B2Q8TB61 432 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 KIAA1257Q9ULG3 409 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 SQORQ9Y6N5 450 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 SYNJ2BP-COX16A0A087WUM0 186 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 KLF11O14901 512 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 GABBR2O75899 941 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 SDC4P31431 198 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 RABGGTBP53611 331 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 ADAM17P78536 824 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 BASP1P80723 227 aaKnown RBP14.19□□□□□ -0.14
LIG1-203ENST00000536218 PPP2R5DQ14738 602 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 FAM209AQ5JX71 171 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 PPP2R2DQ66LE6 453 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 DARS2Q6PI48 645 aaKnown RBP14.19□□□□□ -0.14
LIG1-203ENST00000536218 BBS12Q6ZW61 710 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 PHTF2Q8N3S3 785 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 BHLHE22Q8NFJ8 381 aaPredicted RBP14.19□□□□□ -0.14
LIG1-203ENST00000536218 ZSCAN18Q8TBC5 510 aaPredicted RBP14.19□□□□□ -0.14
LIG1-203ENST00000536218 CAPSLQ8WWF8 208 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 HIPK3Q9H422 1215 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.19□□□□□ -0.142e-6■■■■□ 22.1
LIG1-203ENST00000536218 COX16Q9P0S2 106 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 ARHGAP26Q9UNA1 814 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 RABL2BQ9UNT1 228 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 SHOC2Q9UQ13 582 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 DRG1Q9Y295 367 aaKnown RBP14.19□□□□□ -0.14
LIG1-203ENST00000536218 IPPQ9Y573 584 aa14.19□□□□□ -0.14
LIG1-203ENST00000536218 H7C0C1 242 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 TOP3BO95985 862 aaKnown RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 ATP5OP48047 213 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 NUDT2P50583 147 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 TIGD2Q4W5G0 525 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 PDPK2PQ6A1A2 396 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 RNF19BQ6ZMZ0 732 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 ZNF786Q8N393 782 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 CMASQ8NFW8 434 aaPredicted RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 SLC2A14Q8TDB8 520 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 NKD2Q969F2 451 aaPredicted RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 VPS45Q9NRW7 570 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 RIMS3Q9UJD0 308 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 ANKRD34BA5PLL1 514 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 H3BNH8 94 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 ITGAVP06756 1048 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 RPL22P35268 128 aaKnown RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 AFF1P51825 1210 aaKnown RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 CDC42EP1Q00587 391 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 NME3Q13232 169 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 CA9Q16790 459 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 AARS2Q5JTZ9 985 aaKnown RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 LDLRAP1Q5SW96 308 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 PDZD8Q8NEN9 1154 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 CFAP36Q96G28 342 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 DHRS4Q9BTZ2 278 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 CXorf21Q9HAI6 301 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 PLLPQ9Y342 182 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 TCRBV7S3A2A0A539 114 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 C7orf72A4D263 438 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 PSMD11O00231 422 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 CLDN5O00501 218 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 SULT1C4O75897 302 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 CHEK2O96017 543 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 XRCC1P18887 633 aaPredicted RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 SLC6A3Q01959 620 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 UBXN11Q5T124 520 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 GALNT18Q6P9A2 607 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 DRICH1Q6PGQ1 229 aaPredicted RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 ALKAL1Q6UXT8 129 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 TMEM26Q6ZUK4 368 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 PDIK1LQ8N165 341 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 APPL2Q8NEU8 664 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 SLC35F5Q8WV83 523 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 ZIC5Q96T25 663 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 CDRT15Q96T59 188 aa14.18□□□□□ -0.14
LIG1-203ENST00000536218 WDR83Q9BRX9 315 aaKnown RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 TIMM13Q9Y5L4 95 aaPredicted RBP14.18□□□□□ -0.14
LIG1-203ENST00000536218 ENDOUP21128 410 aaKnown RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 RPS3AP61247 264 aaKnown RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 SLC18A2Q05940 514 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 WASHC5Q12768 1159 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 C17orf99Q6UX52 265 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 FAM47BQ8NA70 645 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 LPPQ93052 612 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms