RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 GFRA3O60609 400 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RNASEH1O60930 286 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LEFTY1O75610 366 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GJB3O75712 270 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RNASEH2AO75792 299 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 EPN2O95208 641 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ADH1BP00325 375 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GSRP00390 522 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KRT10P13645 584 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RHOAP61586 193 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ADCY2Q08462 1091 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SLC10A7Q0GE19 358 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GALNT2Q10471 571 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GSE1Q14687 1217 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LLGL1Q15334 1064 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ELF2Q15723 593 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TTC31Q49AM3 519 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ARSIQ5FYB1 569 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NPNTQ6UXI9 565 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 USP30Q70CQ3 517 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ARMCX6Q7L4S7 300 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 C11orf74Q86VG3 221 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KATNAL2Q8IYT4 538 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HDDC3Q8N4P3 179 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DCLK2Q8N568 766 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TSEN2Q8NCE0 465 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TMIEQ8NEW7 156 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KIAA1524Q8TCG1 905 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GRIN3AQ8TCU5 1115 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CASKIN2Q8WXE0 1202 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ALG3Q92685 438 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ARRDC3Q96B67 414 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NSMCE3Q96MG7 304 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZNF830Q96NB3 372 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HEPHQ9BQS7 1158 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HERPUD2Q9BSE4 406 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GPR174Q9BXC1 333 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZDHHC6Q9H6R6 413 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SP110Q9HB58 689 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FBXL12Q9NXK8 326 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DTLQ9NZJ0 730 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HECAQ9UBI9 543 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 IL36AQ9UHA7 158 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RAB23Q9ULC3 237 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GUCA1BQ9UMX6 200 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SCML1Q9UN30 329 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PACSIN2Q9UNF0 486 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 OTOGLQ3ZCN5 2332 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GPR179Q6PRD1 2367 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ADAMTS9Q9P2N4 1935 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TP53BP1Q12888 1972 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 hCG_1818297A0A087WSY0 165 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 INSIG1O15503 277 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MAP3K13O43283 966 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RHOBTB1O94844 696 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FTCDO95954 541 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CCDC175P0C221 793 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TGM1P22735 817 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CTNNA2P26232 953 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 OXTRP30559 389 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GARSP41250 739 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RECQLP46063 649 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DHPSP49366 369 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PEX5P50542 639 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SNRPD1P62314 119 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CNTN1Q12860 1018 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CCDC6Q16204 474 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PIP5KL1Q5T9C9 394 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 AGBL4Q5VU57 503 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KAZNQ674X7 775 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SLC36A4Q6YBV0 504 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SPOCD1Q6ZMY3 1216 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZNF662Q6ZS27 426 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LPCAT2Q7L5N7 544 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DSG4Q86SJ6 1040 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RFX6Q8HWS3 928 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TXLNBQ8N3L3 684 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PGBD5Q8N414 524 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ATPAF2Q8N5M1 289 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RNF10Q8N5U6 811 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CCDC114Q96M63 670 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HSPA12BQ96MM6 686 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZNF599Q96NL3 588 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 OMDQ99983 421 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TSGA10Q9BZW7 698 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 BTBD1Q9H0C5 482 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ARRDC1-AS1Q9H2J1 176 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 C6orf106Q9H6K1 298 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PARD6AQ9NPB6 346 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 EVLQ9UI08 416 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FZD4Q9ULV1 537 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PCDHA3Q9Y5H8 950 aa11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ATXN2Q99700 1313 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LRRK1Q38SD2 2015 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 BCLAF3A2AJT9 711 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CCDC66A2RUB6 948 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 C1QTNF3-AMACRE9PGA6 284 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms