RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 A0A1B0GVM2 712 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 GOLGA6L3A6NEY3 463 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 LGALS16A8MUM7 142 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 NBPF7P0C2Y1 421 aaPredicted RBP4.78□□□□□ -1.64
VBP1-203ENST00000535916 AVPR2P30518 371 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 TECP42680 631 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 DDR1Q08345 913 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 PTK2BQ14289 1009 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 RAB11FIP2Q7L804 512 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 GALNT7Q86SF2 657 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 PATL1Q86TB9 770 aaKnown RBP4.78□□□□□ -1.64
VBP1-203ENST00000535916 POC1AQ8NBT0 407 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 ZNF114Q8NC26 417 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 TEFMQ96QE5 360 aaKnown RBP4.78□□□□□ -1.64
VBP1-203ENST00000535916 KATNAL1Q9BW62 490 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 ABHD16BQ9H3Z7 469 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 CLK4Q9HAZ1 481 aaKnown RBP4.78□□□□□ -1.64
VBP1-203ENST00000535916 CHPF2Q9P2E5 772 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 C19orf53Q9UNZ5 99 aaPredicted RBP4.78□□□□□ -1.64
VBP1-203ENST00000535916 SLC45A1Q9Y2W3 748 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 NOTCH3Q9UM47 2321 aa4.78□□□□□ -1.64
VBP1-203ENST00000535916 TARSL2A2RTX5 802 aaKnown RBP4.77□□□□□ -1.65
VBP1-203ENST00000535916 C17orf100A8MU93 164 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 PRAC2D3DTV9 90 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 ACTL6BO94805 426 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 CYP4B1P13584 511 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 SERPINA4P29622 427 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 DCTN1Q14203 1278 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 RBM39Q14498 530 aaKnown RBP4.77□□□□□ -1.65
VBP1-203ENST00000535916 RPS6KA2Q15349 733 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 LRRC24Q50LG9 513 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 LCE1FQ5T754 118 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 CCDC181Q5TID7 509 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 AADACL2Q6P093 401 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 GGT6Q6P531 493 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 ZNF449Q6P9G9 518 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 SYNE3Q6ZMZ3 975 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 SMIM29Q86T20 159 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 SRLQ86TD4 932 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 SLC44A2Q8IWA5 706 aaPredicted RBP4.77□□□□□ -1.65
VBP1-203ENST00000535916 BRSK2Q8IWQ3 736 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 SCAMP5Q8TAC9 235 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 BICD1Q96G01 975 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 MSTO1Q9BUK6 570 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 BAG5Q9UL15 447 aa4.77□□□□□ -1.65
VBP1-203ENST00000535916 A0A0U1RQJ8 604 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 TULP2O00295 520 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 HNRNPRO43390 633 aaKnown RBP4.76□□□□□ -1.65
VBP1-203ENST00000535916 CCNT1O60563 726 aaKnown RBP4.76□□□□□ -1.65
VBP1-203ENST00000535916 LMX1BO60663 402 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 ITGA2BP08514 1039 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 PPM1AP35813 382 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 NEK3P51956 506 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 PNLIPRP1P54315 467 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 ARL16Q0P5N6 197 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 DLG1Q12959 904 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 XKR9Q5GH70 373 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 STPG1Q5TH74 334 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 DGAT2L7PQ6IED9 249 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 RHBDF2Q6PJF5 856 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 PGBD5Q8N414 524 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 CPT1BQ92523 772 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 ATOH1Q92858 354 aaPredicted RBP4.76□□□□□ -1.65
VBP1-203ENST00000535916 EID2BQ96D98 161 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 TNIP3Q96KP6 325 aa4.76□□□□□ -1.65
VBP1-203ENST00000535916 SHROOM4Q9ULL8 1493 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 MAGEA13PA6NCF6 341 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 NPIPB11E5RHQ5 1161 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 TIMM23O14925 209 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 CLGNO14967 610 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 ACP5P13686 325 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 CHN1P15882 459 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 AMD1P17707 334 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 DCTDP32321 178 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 GNALP38405 381 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 SKIV2L2P42285 1042 aaKnown RBP4.75□□□□□ -1.65
VBP1-203ENST00000535916 RPS6KA3P51812 740 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 HLTFQ14527 1009 aaKnown RBP eCLIP4.75□□□□□ -1.65
VBP1-203ENST00000535916 TMC8Q8IU68 726 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 NAGSQ8N159 534 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 LMNTD1Q8N9Z9 388 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 RFWD2Q8NHY2 731 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 C3orf49Q96BT1 292 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 EPYCQ99645 322 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 PABPC3Q9H361 631 aaKnown RBP4.75□□□□□ -1.65
VBP1-203ENST00000535916 PRDM8Q9NQV8 689 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 NFS1Q9Y697 457 aa4.75□□□□□ -1.65
VBP1-203ENST00000535916 FFAR2O15552 330 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 XPNPEP2O43895 674 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 CH25HO95992 272 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 ARSAP15289 507 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 RPL3P39023 403 aaKnown RBP4.74□□□□□ -1.65
VBP1-203ENST00000535916 PEX5P50542 639 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 AP2B1P63010 937 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 ADORA2A-AS1P86434 159 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 CYP4A11Q02928 519 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 PDCLQ13371 301 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 PICALMQ13492 652 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 HDAC1Q13547 482 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms